SILENT_MODE BLOCK_FILE jp_w169IAq.concise.blc MAX_NSEQ 881 MAX_INPUT_LEN 883 OUTPUT_FILE jp_w169IAq.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 249 870 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 871 249 880 H SPACE SUB_CHARS 1 871 249 880 E SPACE SUB_CHARS 1 871 249 880 - SPACE STRAND 4 874 13 COLOUR_TEXT_REGION 4 874 13 874 51 STRAND 49 874 49 COLOUR_TEXT_REGION 49 874 49 874 51 STRAND 98 874 104 COLOUR_TEXT_REGION 98 874 104 874 51 STRAND 110 874 111 COLOUR_TEXT_REGION 110 874 111 874 51 STRAND 155 874 156 COLOUR_TEXT_REGION 155 874 156 874 51 STRAND 182 874 185 COLOUR_TEXT_REGION 182 874 185 874 51 STRAND 227 874 229 COLOUR_TEXT_REGION 227 874 229 874 51 STRAND 233 874 238 COLOUR_TEXT_REGION 233 874 238 874 51 HELIX 19 874 28 COLOUR_TEXT_REGION 19 874 28 874 50 HELIX 64 874 66 COLOUR_TEXT_REGION 64 874 66 874 50 HELIX 70 874 85 COLOUR_TEXT_REGION 70 874 85 874 50 HELIX 115 874 119 COLOUR_TEXT_REGION 115 874 119 874 50 HELIX 136 874 148 COLOUR_TEXT_REGION 136 874 148 874 50 HELIX 157 874 176 COLOUR_TEXT_REGION 157 874 176 874 50 HELIX 195 874 206 COLOUR_TEXT_REGION 195 874 206 874 50 HELIX 241 874 246 COLOUR_TEXT_REGION 241 874 246 874 50 STRAND 4 879 13 COLOUR_TEXT_REGION 4 879 13 879 51 STRAND 99 879 104 COLOUR_TEXT_REGION 99 879 104 879 51 STRAND 109 879 112 COLOUR_TEXT_REGION 109 879 112 879 51 STRAND 182 879 186 COLOUR_TEXT_REGION 182 879 186 879 51 STRAND 227 879 229 COLOUR_TEXT_REGION 227 879 229 879 51 STRAND 233 879 238 COLOUR_TEXT_REGION 233 879 238 879 51 HELIX 19 879 27 COLOUR_TEXT_REGION 19 879 27 879 50 HELIX 62 879 67 COLOUR_TEXT_REGION 62 879 67 879 50 HELIX 70 879 85 COLOUR_TEXT_REGION 70 879 85 879 50 HELIX 113 879 120 COLOUR_TEXT_REGION 113 879 120 879 50 HELIX 136 879 148 COLOUR_TEXT_REGION 136 879 148 879 50 HELIX 157 879 176 COLOUR_TEXT_REGION 157 879 176 879 50 HELIX 194 879 207 COLOUR_TEXT_REGION 194 879 207 879 50 HELIX 241 879 246 COLOUR_TEXT_REGION 241 879 246 879 50 STRAND 4 880 13 COLOUR_TEXT_REGION 4 880 13 880 51 STRAND 47 880 51 COLOUR_TEXT_REGION 47 880 51 880 51 STRAND 98 880 103 COLOUR_TEXT_REGION 98 880 103 880 51 STRAND 117 880 119 COLOUR_TEXT_REGION 117 880 119 880 51 STRAND 154 880 157 COLOUR_TEXT_REGION 154 880 157 880 51 STRAND 227 880 230 COLOUR_TEXT_REGION 227 880 230 880 51 STRAND 234 880 239 COLOUR_TEXT_REGION 234 880 239 880 51 HELIX 19 880 28 COLOUR_TEXT_REGION 19 880 28 880 50 HELIX 70 880 85 COLOUR_TEXT_REGION 70 880 85 880 50 HELIX 138 880 149 COLOUR_TEXT_REGION 138 880 149 880 50 HELIX 165 880 176 COLOUR_TEXT_REGION 165 880 176 880 50 HELIX 182 880 184 COLOUR_TEXT_REGION 182 880 184 880 50 HELIX 197 880 205 COLOUR_TEXT_REGION 197 880 205 880 50 HELIX 241 880 246 COLOUR_TEXT_REGION 241 880 246 880 50