SILENT_MODE BLOCK_FILE jp_6xoi3RJ.concise.blc MAX_NSEQ 1093 MAX_INPUT_LEN 1095 OUTPUT_FILE jp_6xoi3RJ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 95 1082 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1083 95 1092 H SPACE SUB_CHARS 1 1083 95 1092 E SPACE SUB_CHARS 1 1083 95 1092 - SPACE STRAND 4 1086 6 COLOUR_TEXT_REGION 4 1086 6 1086 51 STRAND 15 1086 18 COLOUR_TEXT_REGION 15 1086 18 1086 51 STRAND 25 1086 30 COLOUR_TEXT_REGION 25 1086 30 1086 51 STRAND 34 1086 39 COLOUR_TEXT_REGION 34 1086 39 1086 51 STRAND 46 1086 52 COLOUR_TEXT_REGION 46 1086 52 1086 51 STRAND 66 1086 74 COLOUR_TEXT_REGION 66 1086 74 1086 51 STRAND 78 1086 86 COLOUR_TEXT_REGION 78 1086 86 1086 51 STRAND 4 1091 6 COLOUR_TEXT_REGION 4 1091 6 1091 51 STRAND 15 1091 17 COLOUR_TEXT_REGION 15 1091 17 1091 51 STRAND 26 1091 30 COLOUR_TEXT_REGION 26 1091 30 1091 51 STRAND 34 1091 39 COLOUR_TEXT_REGION 34 1091 39 1091 51 STRAND 46 1091 52 COLOUR_TEXT_REGION 46 1091 52 1091 51 STRAND 66 1091 74 COLOUR_TEXT_REGION 66 1091 74 1091 51 STRAND 78 1091 86 COLOUR_TEXT_REGION 78 1091 86 1091 51 STRAND 15 1092 18 COLOUR_TEXT_REGION 15 1092 18 1092 51 STRAND 25 1092 30 COLOUR_TEXT_REGION 25 1092 30 1092 51 STRAND 34 1092 39 COLOUR_TEXT_REGION 34 1092 39 1092 51 STRAND 46 1092 52 COLOUR_TEXT_REGION 46 1092 52 1092 51 STRAND 61 1092 62 COLOUR_TEXT_REGION 61 1092 62 1092 51 STRAND 66 1092 74 COLOUR_TEXT_REGION 66 1092 74 1092 51 STRAND 78 1092 83 COLOUR_TEXT_REGION 78 1092 83 1092 51 STRAND 85 1092 86 COLOUR_TEXT_REGION 85 1092 86 1092 51