SILENT_MODE BLOCK_FILE jp_Nv0LxWH.concise.blc MAX_NSEQ 81 MAX_INPUT_LEN 83 OUTPUT_FILE jp_Nv0LxWH.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 262 70 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 71 262 80 H SPACE SUB_CHARS 1 71 262 80 E SPACE SUB_CHARS 1 71 262 80 - SPACE STRAND 137 74 140 COLOUR_TEXT_REGION 137 74 140 74 51 STRAND 184 74 189 COLOUR_TEXT_REGION 184 74 189 74 51 HELIX 6 74 9 COLOUR_TEXT_REGION 6 74 9 74 50 HELIX 16 74 32 COLOUR_TEXT_REGION 16 74 32 74 50 HELIX 41 74 65 COLOUR_TEXT_REGION 41 74 65 74 50 HELIX 67 74 76 COLOUR_TEXT_REGION 67 74 76 74 50 HELIX 85 74 99 COLOUR_TEXT_REGION 85 74 99 74 50 HELIX 101 74 127 COLOUR_TEXT_REGION 101 74 127 74 50 HELIX 142 74 155 COLOUR_TEXT_REGION 142 74 155 74 50 HELIX 164 74 173 COLOUR_TEXT_REGION 164 74 173 74 50 HELIX 192 74 198 COLOUR_TEXT_REGION 192 74 198 74 50 HELIX 209 74 240 COLOUR_TEXT_REGION 209 74 240 74 50 HELIX 244 74 260 COLOUR_TEXT_REGION 244 74 260 74 50 STRAND 138 79 140 COLOUR_TEXT_REGION 138 79 140 79 51 STRAND 184 79 188 COLOUR_TEXT_REGION 184 79 188 79 51 HELIX 5 79 10 COLOUR_TEXT_REGION 5 79 10 79 50 HELIX 15 79 32 COLOUR_TEXT_REGION 15 79 32 79 50 HELIX 41 79 65 COLOUR_TEXT_REGION 41 79 65 79 50 HELIX 68 79 74 COLOUR_TEXT_REGION 68 79 74 79 50 HELIX 85 79 97 COLOUR_TEXT_REGION 85 79 97 79 50 HELIX 99 79 99 COLOUR_TEXT_REGION 99 79 99 79 50 HELIX 101 79 127 COLOUR_TEXT_REGION 101 79 127 79 50 HELIX 142 79 155 COLOUR_TEXT_REGION 142 79 155 79 50 HELIX 164 79 173 COLOUR_TEXT_REGION 164 79 173 79 50 HELIX 192 79 196 COLOUR_TEXT_REGION 192 79 196 79 50 HELIX 209 79 240 COLOUR_TEXT_REGION 209 79 240 79 50 HELIX 244 79 260 COLOUR_TEXT_REGION 244 79 260 79 50 STRAND 38 80 42 COLOUR_TEXT_REGION 38 80 42 80 51 STRAND 137 80 140 COLOUR_TEXT_REGION 137 80 140 80 51 STRAND 184 80 189 COLOUR_TEXT_REGION 184 80 189 80 51 HELIX 7 80 9 COLOUR_TEXT_REGION 7 80 9 80 50 HELIX 18 80 32 COLOUR_TEXT_REGION 18 80 32 80 50 HELIX 46 80 77 COLOUR_TEXT_REGION 46 80 77 80 50 HELIX 85 80 127 COLOUR_TEXT_REGION 85 80 127 80 50 HELIX 142 80 155 COLOUR_TEXT_REGION 142 80 155 80 50 HELIX 164 80 173 COLOUR_TEXT_REGION 164 80 173 80 50 HELIX 193 80 198 COLOUR_TEXT_REGION 193 80 198 80 50 HELIX 210 80 239 COLOUR_TEXT_REGION 210 80 239 80 50 HELIX 244 80 260 COLOUR_TEXT_REGION 244 80 260 80 50