SILENT_MODE BLOCK_FILE jp_9Wl0s1h.concise.blc MAX_NSEQ 828 MAX_INPUT_LEN 830 OUTPUT_FILE jp_9Wl0s1h.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 259 817 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 818 259 827 H SPACE SUB_CHARS 1 818 259 827 E SPACE SUB_CHARS 1 818 259 827 - SPACE STRAND 4 821 6 COLOUR_TEXT_REGION 4 821 6 821 51 STRAND 14 821 15 COLOUR_TEXT_REGION 14 821 15 821 51 STRAND 40 821 44 COLOUR_TEXT_REGION 40 821 44 821 51 STRAND 67 821 69 COLOUR_TEXT_REGION 67 821 69 821 51 STRAND 88 821 92 COLOUR_TEXT_REGION 88 821 92 821 51 STRAND 125 821 130 COLOUR_TEXT_REGION 125 821 130 821 51 STRAND 147 821 150 COLOUR_TEXT_REGION 147 821 150 821 51 STRAND 207 821 210 COLOUR_TEXT_REGION 207 821 210 821 51 STRAND 230 821 231 COLOUR_TEXT_REGION 230 821 231 821 51 HELIX 11 821 13 COLOUR_TEXT_REGION 11 821 13 821 50 HELIX 26 821 35 COLOUR_TEXT_REGION 26 821 35 821 50 HELIX 53 821 62 COLOUR_TEXT_REGION 53 821 62 821 50 HELIX 75 821 84 COLOUR_TEXT_REGION 75 821 84 821 50 HELIX 110 821 121 COLOUR_TEXT_REGION 110 821 121 821 50 HELIX 135 821 142 COLOUR_TEXT_REGION 135 821 142 821 50 HELIX 167 821 176 COLOUR_TEXT_REGION 167 821 176 821 50 HELIX 184 821 203 COLOUR_TEXT_REGION 184 821 203 821 50 HELIX 217 821 223 COLOUR_TEXT_REGION 217 821 223 821 50 HELIX 235 821 257 COLOUR_TEXT_REGION 235 821 257 821 50 STRAND 3 826 6 COLOUR_TEXT_REGION 3 826 6 826 51 STRAND 40 826 43 COLOUR_TEXT_REGION 40 826 43 826 51 STRAND 67 826 70 COLOUR_TEXT_REGION 67 826 70 826 51 STRAND 88 826 92 COLOUR_TEXT_REGION 88 826 92 826 51 STRAND 125 826 130 COLOUR_TEXT_REGION 125 826 130 826 51 STRAND 147 826 150 COLOUR_TEXT_REGION 147 826 150 826 51 STRAND 207 826 210 COLOUR_TEXT_REGION 207 826 210 826 51 STRAND 230 826 231 COLOUR_TEXT_REGION 230 826 231 826 51 HELIX 11 826 16 COLOUR_TEXT_REGION 11 826 16 826 50 HELIX 26 826 35 COLOUR_TEXT_REGION 26 826 35 826 50 HELIX 53 826 62 COLOUR_TEXT_REGION 53 826 62 826 50 HELIX 75 826 83 COLOUR_TEXT_REGION 75 826 83 826 50 HELIX 111 826 121 COLOUR_TEXT_REGION 111 826 121 826 50 HELIX 134 826 142 COLOUR_TEXT_REGION 134 826 142 826 50 HELIX 154 826 157 COLOUR_TEXT_REGION 154 826 157 826 50 HELIX 167 826 176 COLOUR_TEXT_REGION 167 826 176 826 50 HELIX 180 826 203 COLOUR_TEXT_REGION 180 826 203 826 50 HELIX 217 826 223 COLOUR_TEXT_REGION 217 826 223 826 50 HELIX 235 826 257 COLOUR_TEXT_REGION 235 826 257 826 50 STRAND 4 827 6 COLOUR_TEXT_REGION 4 827 6 827 51 STRAND 13 827 15 COLOUR_TEXT_REGION 13 827 15 827 51 STRAND 40 827 44 COLOUR_TEXT_REGION 40 827 44 827 51 STRAND 67 827 68 COLOUR_TEXT_REGION 67 827 68 827 51 STRAND 88 827 92 COLOUR_TEXT_REGION 88 827 92 827 51 STRAND 125 827 130 COLOUR_TEXT_REGION 125 827 130 827 51 STRAND 147 827 151 COLOUR_TEXT_REGION 147 827 151 827 51 STRAND 207 827 210 COLOUR_TEXT_REGION 207 827 210 827 51 STRAND 230 827 231 COLOUR_TEXT_REGION 230 827 231 827 51 HELIX 9 827 12 COLOUR_TEXT_REGION 9 827 12 827 50 HELIX 26 827 36 COLOUR_TEXT_REGION 26 827 36 827 50 HELIX 53 827 62 COLOUR_TEXT_REGION 53 827 62 827 50 HELIX 75 827 84 COLOUR_TEXT_REGION 75 827 84 827 50 HELIX 109 827 121 COLOUR_TEXT_REGION 109 827 121 827 50 HELIX 137 827 142 COLOUR_TEXT_REGION 137 827 142 827 50 HELIX 167 827 177 COLOUR_TEXT_REGION 167 827 177 827 50 HELIX 184 827 203 COLOUR_TEXT_REGION 184 827 203 827 50 HELIX 217 827 224 COLOUR_TEXT_REGION 217 827 224 827 50 HELIX 235 827 243 COLOUR_TEXT_REGION 235 827 243 827 50 HELIX 246 827 257 COLOUR_TEXT_REGION 246 827 257 827 50