QUERY : PKIQTYVNNNVYEQITDLVTIRKQEGIEEASLSNVSSMLLELGLRVYMIQQ : QUERY
UniRef90_S4VC15 : AKIQAYVSDEVAEKINAIVEKRKAEGAKDVSFSSVSTMLVELGLRVYEAQ- : UniRef90_S4VC15
UniRef90_X2JDF4 : PRVQVYISDQVVEKINAIIEQRRAGGAKDKNFSSISSMLIELGLRVYEAQ- : UniRef90_X2JDF4
UniRef90_L3TEL0 : ARVQAYPSDEVVDKINAIVEKRRAEGAKEKSFSSVATMLLELGLRVYEAQ- : UniRef90_L3TEL0
UniRef90_UPI000464F043 : AKIQVYASDEVTEKIKSIVERRKTEGAKEKSFSSVSSMLLELGLRVYEAQ- : UniRef90_UPI000464F043
UniRef90_V1WGC2 : AKVNVYISNEVHSKIVAIVEKRRQEGARDKSFSGTSSMLLELGLRVYEAQ- : UniRef90_V1WGC2
UniRef90_A1JPQ4 : PKIQTYVNNRVFDGINNIMTERQIEGMPDVSISSVSSMLLELGLRVYELQK : UniRef90_A1JPQ4
UniRef90_P18808 : AKVNLYISNDAYEKINAIIEKRRQEGAKDVSFSATASMLLELGLRVYEAQ- : UniRef90_P18808
UniRef90_UPI0004666D41 : AKIQAYVSDEVVNKINAIVEKRRLEGARDVSFSSISTMLLELGLRVYEAQ- : UniRef90_UPI0004666D41
UniRef90_R9QHL2 : ARVQVYVSDEVSEKIRVIAEKRRAEGAKDVSFSSIASMLVELGLRVYEAQ- : UniRef90_R9QHL2
UniRef90_W8UCC4 : AKIQTYVNNNVYEQINDLVAQRKQEGVGDANVSNIASMLLELGLRVYNIQR : UniRef90_W8UCC4
UniRef90_A4SUM6 : PRVQVYLKHNCIDEIHELVEEDIQAGANEVSFSSKACMLLELGLRVYNLRR : UniRef90_A4SUM6
UniRef90_B1VC83 : AKIQVYVNDHVSEKINAIAVQRRAEGAKEKSYSSIASMLLELGLRVYEAQ- : UniRef90_B1VC83
UniRef90_D4EA62 : ARIQAYVSKEAVEKIHVIVEQRRQEGATEVSTSSVISMLLELGLRVYEAQ- : UniRef90_D4EA62
UniRef90_E0WR85 : PKIQVFVSKAILENINTIVIDKRNDGAKEANTSNTASMLIELGLKVYELQQ : UniRef90_E0WR85
UniRef90_Q2VP28 : PRIQTFVSNQVREEIENLVTERRQEGATDATVSSVTSMLIELGLRVYRIQR : UniRef90_Q2VP28
UniRef90_D2U4P1 : PRLQTFVSHEILSSISDLVEKRRQEGAKEVNVSSIGAMLIELGLRVYKAQ- : UniRef90_D2U4P1
UniRef90_D2U4M8 : ARLQIYTSNDVFNRIVNIVNQQKNEGATEISLSSVGTMLLELGLRVYEAQQ : UniRef90_D2U4M8
UniRef90_R9NH17 : PRAQVYITQNNYKRIQSIVDAKKEDGATEANVSSVAAMLLDIGLRVYEFQQ : UniRef90_R9NH17
UniRef90_X8LGT8 : ARQNVYMSQKVYDAIKTIVDERRADGAADANMSSVCSEMLDIGVRV----- : UniRef90_X8LGT8
UniRef90_X8MWZ5 : PRQHIYMKQKALDGIRNIVDKRKADGA-DANISSVGSELLDIGLRVVE--- : UniRef90_X8MWZ5
UniRef90_T8ZSJ1 : PRQNVYMKQKTLDGIRQLVDERLAEGATDVNMSSVCSELLETGLRVVQ--- : UniRef90_T8ZSJ1
UniRef90_G7D1M9 : --------NAVIDEIKGLVEEDIQAGADEVSFSSKTSMLLELGLRVYNLRR : UniRef90_G7D1M9
UniRef90_UPI0003617FD5 : ------MKQKTIDGIRQIVDMRREEGATDANISSVCSEMLELGMRVY---- : UniRef90_UPI0003617FD5
UniRef90_X6PGA3 : ------MNQKTYDALKSIVEERRVDGASDANMSSVSSEMLEIGIRV----- : UniRef90_X6PGA3
UniRef90_K8W687 : PKQHIYLPQKTLDKIKSMVDERLNHGATDANISKLCVEMINIGIRAFEYHQ : UniRef90_K8W687
UniRef90_UPI0003EE2DB5 : ------MTQKTLNGVRKLVEERRSEGAAEANISSVCAELLTIGLRVTE--- : UniRef90_UPI0003EE2DB5
UniRef90_S0AKM5 : -RLNIYVKQKIESEIRDIVQAEIQKGANEMTISSMCNELLRLGLMVYKAQ- : UniRef90_S0AKM5
UniRef90_K8CVP0 : -RLGIYLKDKIEREVRDIVAKDIQNGASEANISATCNELIRLGLLVYK--- : UniRef90_K8CVP0
UniRef90_UPI000467E021 : PRKNIYFKDKIDREIEDILEIERQKGAAENNYSSVVNELVRLGLMVYKSK- : UniRef90_UPI000467E021
: 1---------11--------21--------31--------41-------- :
OrigSeq : PKIQTYVNNNVYEQITDLVTIRKQEGIEEASLSNVSSMLLELGLRVYMIQQ : OrigSeq
Jnet : ----EEE-HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH--- : Jnet
jhmm : -----EE-HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH-- : jhmm
jpssm : --EEEE--HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH--- : jpssm
Lupas 14 : --------------------------------------------------- : Lupas 14
Lupas 21 : --------------------------------------------------- : Lupas 21
Lupas 28 : --------------------------------------------------- : Lupas 28
Jnet_25 : --B-BBB---BB--B--BB-------B--B-BBBBBBBBB-BBB-BB-B-- : Jnet_25
Jnet_5 : ----------B---B---B----------------B--BB-BBB------- : Jnet_5
Jnet_0 : --------------B---------------------------B-------- : Jnet_0
Jnet Rel : 994114026999999999999875268754113899999887266752159 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.