SILENT_MODE BLOCK_FILE jp_9FkZ2JO.concise.blc MAX_NSEQ 370 MAX_INPUT_LEN 372 OUTPUT_FILE jp_9FkZ2JO.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 100 359 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 360 100 369 H SPACE SUB_CHARS 1 360 100 369 E SPACE SUB_CHARS 1 360 100 369 - SPACE STRAND 4 363 9 COLOUR_TEXT_REGION 4 363 9 363 51 STRAND 36 363 39 COLOUR_TEXT_REGION 36 363 39 363 51 STRAND 43 363 49 COLOUR_TEXT_REGION 43 363 49 363 51 STRAND 58 363 67 COLOUR_TEXT_REGION 58 363 67 363 51 STRAND 73 363 79 COLOUR_TEXT_REGION 73 363 79 363 51 HELIX 19 363 32 COLOUR_TEXT_REGION 19 363 32 363 50 HELIX 84 363 97 COLOUR_TEXT_REGION 84 363 97 363 50 STRAND 4 368 5 COLOUR_TEXT_REGION 4 368 5 368 51 STRAND 36 368 39 COLOUR_TEXT_REGION 36 368 39 368 51 STRAND 43 368 49 COLOUR_TEXT_REGION 43 368 49 368 51 STRAND 58 368 67 COLOUR_TEXT_REGION 58 368 67 368 51 STRAND 74 368 79 COLOUR_TEXT_REGION 74 368 79 368 51 HELIX 19 368 32 COLOUR_TEXT_REGION 19 368 32 368 50 HELIX 84 368 97 COLOUR_TEXT_REGION 84 368 97 368 50 STRAND 4 369 9 COLOUR_TEXT_REGION 4 369 9 369 51 STRAND 12 369 13 COLOUR_TEXT_REGION 12 369 13 369 51 STRAND 36 369 39 COLOUR_TEXT_REGION 36 369 39 369 51 STRAND 44 369 48 COLOUR_TEXT_REGION 44 369 48 369 51 STRAND 58 369 66 COLOUR_TEXT_REGION 58 369 66 369 51 STRAND 72 369 80 COLOUR_TEXT_REGION 72 369 80 369 51 HELIX 19 369 32 COLOUR_TEXT_REGION 19 369 32 369 50 HELIX 84 369 98 COLOUR_TEXT_REGION 84 369 98 369 50