SILENT_MODE BLOCK_FILE jp_MVZGMG4.concise.blc MAX_NSEQ 375 MAX_INPUT_LEN 377 OUTPUT_FILE jp_MVZGMG4.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 190 364 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 365 190 374 H SPACE SUB_CHARS 1 365 190 374 E SPACE SUB_CHARS 1 365 190 374 - SPACE STRAND 5 368 6 COLOUR_TEXT_REGION 5 368 6 368 51 STRAND 22 368 26 COLOUR_TEXT_REGION 22 368 26 368 51 STRAND 30 368 34 COLOUR_TEXT_REGION 30 368 34 368 51 STRAND 58 368 61 COLOUR_TEXT_REGION 58 368 61 368 51 STRAND 83 368 88 COLOUR_TEXT_REGION 83 368 88 368 51 STRAND 111 368 112 COLOUR_TEXT_REGION 111 368 112 368 51 STRAND 133 368 137 COLOUR_TEXT_REGION 133 368 137 368 51 STRAND 141 368 145 COLOUR_TEXT_REGION 141 368 145 368 51 STRAND 188 368 189 COLOUR_TEXT_REGION 188 368 189 368 51 HELIX 41 368 53 COLOUR_TEXT_REGION 41 368 53 368 50 HELIX 68 368 76 COLOUR_TEXT_REGION 68 368 76 368 50 HELIX 95 368 106 COLOUR_TEXT_REGION 95 368 106 368 50 HELIX 150 368 165 COLOUR_TEXT_REGION 150 368 165 368 50 HELIX 171 368 183 COLOUR_TEXT_REGION 171 368 183 368 50 STRAND 5 373 6 COLOUR_TEXT_REGION 5 373 6 373 51 STRAND 22 373 26 COLOUR_TEXT_REGION 22 373 26 373 51 STRAND 30 373 34 COLOUR_TEXT_REGION 30 373 34 373 51 STRAND 58 373 61 COLOUR_TEXT_REGION 58 373 61 373 51 STRAND 83 373 88 COLOUR_TEXT_REGION 83 373 88 373 51 STRAND 111 373 112 COLOUR_TEXT_REGION 111 373 112 373 51 STRAND 130 373 137 COLOUR_TEXT_REGION 130 373 137 373 51 STRAND 141 373 144 COLOUR_TEXT_REGION 141 373 144 373 51 HELIX 41 373 53 COLOUR_TEXT_REGION 41 373 53 373 50 HELIX 67 373 77 COLOUR_TEXT_REGION 67 373 77 373 50 HELIX 94 373 107 COLOUR_TEXT_REGION 94 373 107 373 50 HELIX 150 373 166 COLOUR_TEXT_REGION 150 373 166 373 50 HELIX 173 373 183 COLOUR_TEXT_REGION 173 373 183 373 50 STRAND 5 374 6 COLOUR_TEXT_REGION 5 374 6 374 51 STRAND 23 374 27 COLOUR_TEXT_REGION 23 374 27 374 51 STRAND 30 374 33 COLOUR_TEXT_REGION 30 374 33 374 51 STRAND 58 374 61 COLOUR_TEXT_REGION 58 374 61 374 51 STRAND 72 374 75 COLOUR_TEXT_REGION 72 374 75 374 51 STRAND 84 374 88 COLOUR_TEXT_REGION 84 374 88 374 51 STRAND 111 374 111 COLOUR_TEXT_REGION 111 374 111 374 51 STRAND 133 374 137 COLOUR_TEXT_REGION 133 374 137 374 51 STRAND 141 374 145 COLOUR_TEXT_REGION 141 374 145 374 51 STRAND 188 374 189 COLOUR_TEXT_REGION 188 374 189 374 51 HELIX 42 374 52 COLOUR_TEXT_REGION 42 374 52 374 50 HELIX 98 374 105 COLOUR_TEXT_REGION 98 374 105 374 50 HELIX 151 374 165 COLOUR_TEXT_REGION 151 374 165 374 50 HELIX 170 374 183 COLOUR_TEXT_REGION 170 374 183 374 50