SILENT_MODE BLOCK_FILE jp_Git0G9R.concise.blc MAX_NSEQ 1036 MAX_INPUT_LEN 1038 OUTPUT_FILE jp_Git0G9R.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 148 1025 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1026 148 1035 H SPACE SUB_CHARS 1 1026 148 1035 E SPACE SUB_CHARS 1 1026 148 1035 - SPACE STRAND 12 1029 14 COLOUR_TEXT_REGION 12 1029 14 1029 51 STRAND 58 1029 58 COLOUR_TEXT_REGION 58 1029 58 1029 51 STRAND 63 1029 66 COLOUR_TEXT_REGION 63 1029 66 1029 51 STRAND 78 1029 83 COLOUR_TEXT_REGION 78 1029 83 1029 51 STRAND 98 1029 105 COLOUR_TEXT_REGION 98 1029 105 1029 51 HELIX 21 1029 35 COLOUR_TEXT_REGION 21 1029 35 1029 50 HELIX 40 1029 52 COLOUR_TEXT_REGION 40 1029 52 1029 50 HELIX 110 1029 123 COLOUR_TEXT_REGION 110 1029 123 1029 50 HELIX 126 1029 134 COLOUR_TEXT_REGION 126 1029 134 1029 50 HELIX 138 1029 146 COLOUR_TEXT_REGION 138 1029 146 1029 50 STRAND 12 1034 13 COLOUR_TEXT_REGION 12 1034 13 1034 51 STRAND 63 1034 65 COLOUR_TEXT_REGION 63 1034 65 1034 51 STRAND 77 1034 83 COLOUR_TEXT_REGION 77 1034 83 1034 51 STRAND 98 1034 105 COLOUR_TEXT_REGION 98 1034 105 1034 51 HELIX 21 1034 35 COLOUR_TEXT_REGION 21 1034 35 1034 50 HELIX 40 1034 52 COLOUR_TEXT_REGION 40 1034 52 1034 50 HELIX 111 1034 123 COLOUR_TEXT_REGION 111 1034 123 1034 50 HELIX 126 1034 134 COLOUR_TEXT_REGION 126 1034 134 1034 50 HELIX 138 1034 146 COLOUR_TEXT_REGION 138 1034 146 1034 50 STRAND 12 1035 16 COLOUR_TEXT_REGION 12 1035 16 1035 51 STRAND 58 1035 58 COLOUR_TEXT_REGION 58 1035 58 1035 51 STRAND 63 1035 67 COLOUR_TEXT_REGION 63 1035 67 1035 51 STRAND 98 1035 105 COLOUR_TEXT_REGION 98 1035 105 1035 51 HELIX 21 1035 34 COLOUR_TEXT_REGION 21 1035 34 1035 50 HELIX 40 1035 52 COLOUR_TEXT_REGION 40 1035 52 1035 50 HELIX 79 1035 81 COLOUR_TEXT_REGION 79 1035 81 1035 50 HELIX 110 1035 123 COLOUR_TEXT_REGION 110 1035 123 1035 50 HELIX 125 1035 134 COLOUR_TEXT_REGION 125 1035 134 1035 50 HELIX 138 1035 146 COLOUR_TEXT_REGION 138 1035 146 1035 50