SILENT_MODE BLOCK_FILE jp_DDFsyYI.concise.blc MAX_NSEQ 136 MAX_INPUT_LEN 138 OUTPUT_FILE jp_DDFsyYI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 118 125 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 126 118 135 H SPACE SUB_CHARS 1 126 118 135 E SPACE SUB_CHARS 1 126 118 135 - SPACE STRAND 7 129 20 COLOUR_TEXT_REGION 7 129 20 129 51 STRAND 38 129 45 COLOUR_TEXT_REGION 38 129 45 129 51 STRAND 49 129 52 COLOUR_TEXT_REGION 49 129 52 129 51 STRAND 58 129 64 COLOUR_TEXT_REGION 58 129 64 129 51 STRAND 67 129 72 COLOUR_TEXT_REGION 67 129 72 129 51 STRAND 75 129 83 COLOUR_TEXT_REGION 75 129 83 129 51 STRAND 89 129 93 COLOUR_TEXT_REGION 89 129 93 129 51 STRAND 100 129 104 COLOUR_TEXT_REGION 100 129 104 129 51 STRAND 110 129 117 COLOUR_TEXT_REGION 110 129 117 129 51 STRAND 6 134 20 COLOUR_TEXT_REGION 6 134 20 134 51 STRAND 39 134 45 COLOUR_TEXT_REGION 39 134 45 134 51 STRAND 49 134 52 COLOUR_TEXT_REGION 49 134 52 134 51 STRAND 57 134 64 COLOUR_TEXT_REGION 57 134 64 134 51 STRAND 67 134 72 COLOUR_TEXT_REGION 67 134 72 134 51 STRAND 75 134 84 COLOUR_TEXT_REGION 75 134 84 134 51 STRAND 89 134 93 COLOUR_TEXT_REGION 89 134 93 134 51 STRAND 100 134 103 COLOUR_TEXT_REGION 100 134 103 134 51 STRAND 110 134 116 COLOUR_TEXT_REGION 110 134 116 134 51 STRAND 11 135 20 COLOUR_TEXT_REGION 11 135 20 135 51 STRAND 38 135 45 COLOUR_TEXT_REGION 38 135 45 135 51 STRAND 49 135 52 COLOUR_TEXT_REGION 49 135 52 135 51 STRAND 58 135 63 COLOUR_TEXT_REGION 58 135 63 135 51 STRAND 67 135 72 COLOUR_TEXT_REGION 67 135 72 135 51 STRAND 76 135 83 COLOUR_TEXT_REGION 76 135 83 135 51 STRAND 90 135 93 COLOUR_TEXT_REGION 90 135 93 135 51 STRAND 100 135 104 COLOUR_TEXT_REGION 100 135 104 135 51 STRAND 110 135 117 COLOUR_TEXT_REGION 110 135 117 135 51