SILENT_MODE
BLOCK_FILE jp_az8JQh3.concise.blc
MAX_NSEQ 802
MAX_INPUT_LEN 804
OUTPUT_FILE jp_az8JQh3.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 176 791   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 792 176 801 H SPACE
SUB_CHARS 1 792 176 801 E SPACE
SUB_CHARS 1 792 176 801 - SPACE
STRAND 16 795 23
COLOUR_TEXT_REGION 16 795 23 795 51
STRAND 30 795 34
COLOUR_TEXT_REGION 30 795 34 795 51
STRAND 40 795 44
COLOUR_TEXT_REGION 40 795 44 795 51
STRAND 71 795 75
COLOUR_TEXT_REGION 71 795 75 795 51
STRAND 84 795 96
COLOUR_TEXT_REGION 84 795 96 795 51
STRAND 104 795 109
COLOUR_TEXT_REGION 104 795 109 795 51
STRAND 147 795 151
COLOUR_TEXT_REGION 147 795 151 795 51
HELIX 122 795 122
COLOUR_TEXT_REGION 122 795 122 795 50
HELIX 125 795 139
COLOUR_TEXT_REGION 125 795 139 795 50
HELIX 155 795 173
COLOUR_TEXT_REGION 155 795 173 795 50
STRAND 16 800 23
COLOUR_TEXT_REGION 16 800 23 800 51
STRAND 30 800 34
COLOUR_TEXT_REGION 30 800 34 800 51
STRAND 40 800 44
COLOUR_TEXT_REGION 40 800 44 800 51
STRAND 70 800 75
COLOUR_TEXT_REGION 70 800 75 800 51
STRAND 84 800 97
COLOUR_TEXT_REGION 84 800 97 800 51
STRAND 104 800 109
COLOUR_TEXT_REGION 104 800 109 800 51
STRAND 148 800 150
COLOUR_TEXT_REGION 148 800 150 800 51
HELIX 126 800 138
COLOUR_TEXT_REGION 126 800 138 800 50
HELIX 155 800 173
COLOUR_TEXT_REGION 155 800 173 800 50
STRAND 16 801 23
COLOUR_TEXT_REGION 16 801 23 801 51
STRAND 31 801 34
COLOUR_TEXT_REGION 31 801 34 801 51
STRAND 40 801 43
COLOUR_TEXT_REGION 40 801 43 801 51
STRAND 71 801 75
COLOUR_TEXT_REGION 71 801 75 801 51
STRAND 83 801 95
COLOUR_TEXT_REGION 83 801 95 801 51
STRAND 104 801 109
COLOUR_TEXT_REGION 104 801 109 801 51
STRAND 147 801 151
COLOUR_TEXT_REGION 147 801 151 801 51
HELIX 122 801 139
COLOUR_TEXT_REGION 122 801 139 801 50
HELIX 155 801 173
COLOUR_TEXT_REGION 155 801 173 801 50