SILENT_MODE BLOCK_FILE jp_fOhibbj.concise.blc MAX_NSEQ 729 MAX_INPUT_LEN 731 OUTPUT_FILE jp_fOhibbj.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 144 718 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 719 144 728 H SPACE SUB_CHARS 1 719 144 728 E SPACE SUB_CHARS 1 719 144 728 - SPACE HELIX 2 722 15 COLOUR_TEXT_REGION 2 722 15 722 50 HELIX 17 722 31 COLOUR_TEXT_REGION 17 722 31 722 50 HELIX 35 722 36 COLOUR_TEXT_REGION 35 722 36 722 50 HELIX 54 722 72 COLOUR_TEXT_REGION 54 722 72 722 50 HELIX 77 722 89 COLOUR_TEXT_REGION 77 722 89 722 50 HELIX 98 722 111 COLOUR_TEXT_REGION 98 722 111 722 50 HELIX 117 722 140 COLOUR_TEXT_REGION 117 722 140 722 50 HELIX 2 727 15 COLOUR_TEXT_REGION 2 727 15 727 50 HELIX 17 727 31 COLOUR_TEXT_REGION 17 727 31 727 50 HELIX 35 727 37 COLOUR_TEXT_REGION 35 727 37 727 50 HELIX 54 727 72 COLOUR_TEXT_REGION 54 727 72 727 50 HELIX 78 727 89 COLOUR_TEXT_REGION 78 727 89 727 50 HELIX 98 727 111 COLOUR_TEXT_REGION 98 727 111 727 50 HELIX 117 727 140 COLOUR_TEXT_REGION 117 727 140 727 50 HELIX 2 728 13 COLOUR_TEXT_REGION 2 728 13 728 50 HELIX 17 728 31 COLOUR_TEXT_REGION 17 728 31 728 50 HELIX 54 728 72 COLOUR_TEXT_REGION 54 728 72 728 50 HELIX 77 728 88 COLOUR_TEXT_REGION 77 728 88 728 50 HELIX 102 728 112 COLOUR_TEXT_REGION 102 728 112 728 50 HELIX 117 728 140 COLOUR_TEXT_REGION 117 728 140 728 50