SILENT_MODE
BLOCK_FILE jp_rNKgqlI.concise.blc
MAX_NSEQ 814
MAX_INPUT_LEN 816
OUTPUT_FILE jp_rNKgqlI.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 120 803   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 804 120 813 H SPACE
SUB_CHARS 1 804 120 813 E SPACE
SUB_CHARS 1 804 120 813 - SPACE
STRAND 20 807 24
COLOUR_TEXT_REGION 20 807 24 807 51
STRAND 27 807 34
COLOUR_TEXT_REGION 27 807 34 807 51
STRAND 44 807 50
COLOUR_TEXT_REGION 44 807 50 807 51
STRAND 53 807 58
COLOUR_TEXT_REGION 53 807 58 807 51
STRAND 63 807 65
COLOUR_TEXT_REGION 63 807 65 807 51
STRAND 79 807 83
COLOUR_TEXT_REGION 79 807 83 807 51
STRAND 87 807 94
COLOUR_TEXT_REGION 87 807 94 807 51
STRAND 104 807 105
COLOUR_TEXT_REGION 104 807 105 807 51
STRAND 20 812 24
COLOUR_TEXT_REGION 20 812 24 812 51
STRAND 27 812 34
COLOUR_TEXT_REGION 27 812 34 812 51
STRAND 44 812 50
COLOUR_TEXT_REGION 44 812 50 812 51
STRAND 53 812 58
COLOUR_TEXT_REGION 53 812 58 812 51
STRAND 63 812 65
COLOUR_TEXT_REGION 63 812 65 812 51
STRAND 79 812 83
COLOUR_TEXT_REGION 79 812 83 812 51
STRAND 87 812 94
COLOUR_TEXT_REGION 87 812 94 812 51
STRAND 105 812 105
COLOUR_TEXT_REGION 105 812 105 812 51
STRAND 19 813 23
COLOUR_TEXT_REGION 19 813 23 813 51
STRAND 28 813 33
COLOUR_TEXT_REGION 28 813 33 813 51
STRAND 43 813 49
COLOUR_TEXT_REGION 43 813 49 813 51
STRAND 53 813 58
COLOUR_TEXT_REGION 53 813 58 813 51
STRAND 62 813 65
COLOUR_TEXT_REGION 62 813 65 813 51
STRAND 79 813 82
COLOUR_TEXT_REGION 79 813 82 813 51
STRAND 87 813 94
COLOUR_TEXT_REGION 87 813 94 813 51
STRAND 104 813 105
COLOUR_TEXT_REGION 104 813 105 813 51