SILENT_MODE BLOCK_FILE jp_GrVegvU.concise.blc MAX_NSEQ 1212 MAX_INPUT_LEN 1214 OUTPUT_FILE jp_GrVegvU.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 197 1201 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1202 197 1211 H SPACE SUB_CHARS 1 1202 197 1211 E SPACE SUB_CHARS 1 1202 197 1211 - SPACE STRAND 19 1205 25 COLOUR_TEXT_REGION 19 1205 25 1205 51 STRAND 53 1205 59 COLOUR_TEXT_REGION 53 1205 59 1205 51 STRAND 98 1205 103 COLOUR_TEXT_REGION 98 1205 103 1205 51 STRAND 126 1205 132 COLOUR_TEXT_REGION 126 1205 132 1205 51 STRAND 152 1205 156 COLOUR_TEXT_REGION 152 1205 156 1205 51 HELIX 37 1205 47 COLOUR_TEXT_REGION 37 1205 47 1205 50 HELIX 77 1205 92 COLOUR_TEXT_REGION 77 1205 92 1205 50 HELIX 108 1205 113 COLOUR_TEXT_REGION 108 1205 113 1205 50 HELIX 181 1205 194 COLOUR_TEXT_REGION 181 1205 194 1205 50 STRAND 19 1210 25 COLOUR_TEXT_REGION 19 1210 25 1210 51 STRAND 53 1210 59 COLOUR_TEXT_REGION 53 1210 59 1210 51 STRAND 98 1210 104 COLOUR_TEXT_REGION 98 1210 104 1210 51 STRAND 126 1210 132 COLOUR_TEXT_REGION 126 1210 132 1210 51 STRAND 152 1210 156 COLOUR_TEXT_REGION 152 1210 156 1210 51 HELIX 37 1210 47 COLOUR_TEXT_REGION 37 1210 47 1210 50 HELIX 76 1210 92 COLOUR_TEXT_REGION 76 1210 92 1210 50 HELIX 107 1210 115 COLOUR_TEXT_REGION 107 1210 115 1210 50 HELIX 181 1210 194 COLOUR_TEXT_REGION 181 1210 194 1210 50 STRAND 19 1211 25 COLOUR_TEXT_REGION 19 1211 25 1211 51 STRAND 54 1211 58 COLOUR_TEXT_REGION 54 1211 58 1211 51 STRAND 61 1211 61 COLOUR_TEXT_REGION 61 1211 61 1211 51 STRAND 98 1211 102 COLOUR_TEXT_REGION 98 1211 102 1211 51 STRAND 126 1211 132 COLOUR_TEXT_REGION 126 1211 132 1211 51 STRAND 151 1211 156 COLOUR_TEXT_REGION 151 1211 156 1211 51 HELIX 38 1211 47 COLOUR_TEXT_REGION 38 1211 47 1211 50 HELIX 79 1211 92 COLOUR_TEXT_REGION 79 1211 92 1211 50 HELIX 108 1211 112 COLOUR_TEXT_REGION 108 1211 112 1211 50 HELIX 181 1211 194 COLOUR_TEXT_REGION 181 1211 194 1211 50