SILENT_MODE
BLOCK_FILE jp_Ss0m7rQ.concise.blc
MAX_NSEQ 136
MAX_INPUT_LEN 138
OUTPUT_FILE jp_Ss0m7rQ.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 80 125   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 126 80 135 H SPACE
SUB_CHARS 1 126 80 135 E SPACE
SUB_CHARS 1 126 80 135 - SPACE
STRAND 7 129 12
COLOUR_TEXT_REGION 7 129 12 129 51
STRAND 39 129 42
COLOUR_TEXT_REGION 39 129 42 129 51
STRAND 45 129 49
COLOUR_TEXT_REGION 45 129 49 129 51
STRAND 54 129 62
COLOUR_TEXT_REGION 54 129 62 129 51
STRAND 68 129 70
COLOUR_TEXT_REGION 68 129 70 129 51
STRAND 74 129 78
COLOUR_TEXT_REGION 74 129 78 129 51
HELIX 23 129 32
COLOUR_TEXT_REGION 23 129 32 129 50
STRAND 7 134 12
COLOUR_TEXT_REGION 7 134 12 134 51
STRAND 39 134 42
COLOUR_TEXT_REGION 39 134 42 134 51
STRAND 45 134 49
COLOUR_TEXT_REGION 45 134 49 134 51
STRAND 54 134 62
COLOUR_TEXT_REGION 54 134 62 134 51
STRAND 67 134 70
COLOUR_TEXT_REGION 67 134 70 134 51
STRAND 74 134 78
COLOUR_TEXT_REGION 74 134 78 134 51
HELIX 22 134 32
COLOUR_TEXT_REGION 22 134 32 134 50
STRAND 7 135 13
COLOUR_TEXT_REGION 7 135 13 135 51
STRAND 41 135 41
COLOUR_TEXT_REGION 41 135 41 135 51
STRAND 45 135 49
COLOUR_TEXT_REGION 45 135 49 135 51
STRAND 54 135 62
COLOUR_TEXT_REGION 54 135 62 135 51
STRAND 69 135 70
COLOUR_TEXT_REGION 69 135 70 135 51
STRAND 74 135 78
COLOUR_TEXT_REGION 74 135 78 135 51
HELIX 24 135 32
COLOUR_TEXT_REGION 24 135 32 135 50