SILENT_MODE BLOCK_FILE jp_2EAv4S1.concise.blc MAX_NSEQ 1044 MAX_INPUT_LEN 1046 OUTPUT_FILE jp_2EAv4S1.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 122 1033 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1034 122 1043 H SPACE SUB_CHARS 1 1034 122 1043 E SPACE SUB_CHARS 1 1034 122 1043 - SPACE STRAND 57 1037 58 COLOUR_TEXT_REGION 57 1037 58 1037 51 HELIX 5 1037 21 COLOUR_TEXT_REGION 5 1037 21 1037 50 HELIX 27 1037 34 COLOUR_TEXT_REGION 27 1037 34 1037 50 HELIX 43 1037 54 COLOUR_TEXT_REGION 43 1037 54 1037 50 HELIX 65 1037 73 COLOUR_TEXT_REGION 65 1037 73 1037 50 HELIX 81 1037 91 COLOUR_TEXT_REGION 81 1037 91 1037 50 HELIX 100 1037 114 COLOUR_TEXT_REGION 100 1037 114 1037 50 STRAND 56 1042 59 COLOUR_TEXT_REGION 56 1042 59 1042 51 HELIX 5 1042 21 COLOUR_TEXT_REGION 5 1042 21 1042 50 HELIX 27 1042 34 COLOUR_TEXT_REGION 27 1042 34 1042 50 HELIX 44 1042 54 COLOUR_TEXT_REGION 44 1042 54 1042 50 HELIX 65 1042 72 COLOUR_TEXT_REGION 65 1042 72 1042 50 HELIX 81 1042 91 COLOUR_TEXT_REGION 81 1042 91 1042 50 HELIX 100 1042 114 COLOUR_TEXT_REGION 100 1042 114 1042 50 HELIX 5 1043 20 COLOUR_TEXT_REGION 5 1043 20 1043 50 HELIX 27 1043 34 COLOUR_TEXT_REGION 27 1043 34 1043 50 HELIX 42 1043 54 COLOUR_TEXT_REGION 42 1043 54 1043 50 HELIX 65 1043 74 COLOUR_TEXT_REGION 65 1043 74 1043 50 HELIX 80 1043 91 COLOUR_TEXT_REGION 80 1043 91 1043 50 HELIX 101 1043 114 COLOUR_TEXT_REGION 101 1043 114 1043 50