SILENT_MODE BLOCK_FILE jp_6XypfaZ.concise.blc MAX_NSEQ 217 MAX_INPUT_LEN 219 OUTPUT_FILE jp_6XypfaZ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 247 206 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 207 247 216 H SPACE SUB_CHARS 1 207 247 216 E SPACE SUB_CHARS 1 207 247 216 - SPACE STRAND 78 210 81 COLOUR_TEXT_REGION 78 210 81 210 51 STRAND 113 210 117 COLOUR_TEXT_REGION 113 210 117 210 51 STRAND 122 210 128 COLOUR_TEXT_REGION 122 210 128 210 51 STRAND 133 210 137 COLOUR_TEXT_REGION 133 210 137 210 51 STRAND 151 210 153 COLOUR_TEXT_REGION 151 210 153 210 51 STRAND 176 210 181 COLOUR_TEXT_REGION 176 210 181 210 51 STRAND 186 210 189 COLOUR_TEXT_REGION 186 210 189 210 51 STRAND 196 210 198 COLOUR_TEXT_REGION 196 210 198 210 51 STRAND 202 210 204 COLOUR_TEXT_REGION 202 210 204 210 51 STRAND 210 210 212 COLOUR_TEXT_REGION 210 210 212 210 51 STRAND 217 210 221 COLOUR_TEXT_REGION 217 210 221 210 51 STRAND 227 210 230 COLOUR_TEXT_REGION 227 210 230 210 51 STRAND 237 210 238 COLOUR_TEXT_REGION 237 210 238 210 51 STRAND 241 210 245 COLOUR_TEXT_REGION 241 210 245 210 51 HELIX 4 210 26 COLOUR_TEXT_REGION 4 210 26 210 50 HELIX 31 210 49 COLOUR_TEXT_REGION 31 210 49 210 50 HELIX 54 210 77 COLOUR_TEXT_REGION 54 210 77 210 50 HELIX 93 210 102 COLOUR_TEXT_REGION 93 210 102 210 50 HELIX 164 210 175 COLOUR_TEXT_REGION 164 210 175 210 50 STRAND 77 215 81 COLOUR_TEXT_REGION 77 215 81 215 51 STRAND 113 215 117 COLOUR_TEXT_REGION 113 215 117 215 51 STRAND 121 215 128 COLOUR_TEXT_REGION 121 215 128 215 51 STRAND 133 215 136 COLOUR_TEXT_REGION 133 215 136 215 51 STRAND 152 215 153 COLOUR_TEXT_REGION 152 215 153 215 51 STRAND 176 215 181 COLOUR_TEXT_REGION 176 215 181 215 51 STRAND 186 215 188 COLOUR_TEXT_REGION 186 215 188 215 51 STRAND 196 215 198 COLOUR_TEXT_REGION 196 215 198 215 51 STRAND 202 215 204 COLOUR_TEXT_REGION 202 215 204 215 51 STRAND 210 215 212 COLOUR_TEXT_REGION 210 215 212 215 51 STRAND 217 215 221 COLOUR_TEXT_REGION 217 215 221 215 51 STRAND 227 215 230 COLOUR_TEXT_REGION 227 215 230 215 51 STRAND 237 215 238 COLOUR_TEXT_REGION 237 215 238 215 51 STRAND 242 215 245 COLOUR_TEXT_REGION 242 215 245 215 51 HELIX 3 215 27 COLOUR_TEXT_REGION 3 215 27 215 50 HELIX 30 215 49 COLOUR_TEXT_REGION 30 215 49 215 50 HELIX 54 215 76 COLOUR_TEXT_REGION 54 215 76 215 50 HELIX 93 215 102 COLOUR_TEXT_REGION 93 215 102 215 50 HELIX 164 215 175 COLOUR_TEXT_REGION 164 215 175 215 50 STRAND 54 216 59 COLOUR_TEXT_REGION 54 216 59 216 51 STRAND 81 216 81 COLOUR_TEXT_REGION 81 216 81 216 51 STRAND 113 216 117 COLOUR_TEXT_REGION 113 216 117 216 51 STRAND 122 216 127 COLOUR_TEXT_REGION 122 216 127 216 51 STRAND 134 216 137 COLOUR_TEXT_REGION 134 216 137 216 51 STRAND 149 216 153 COLOUR_TEXT_REGION 149 216 153 216 51 STRAND 177 216 181 COLOUR_TEXT_REGION 177 216 181 216 51 STRAND 186 216 189 COLOUR_TEXT_REGION 186 216 189 216 51 STRAND 196 216 199 COLOUR_TEXT_REGION 196 216 199 216 51 STRAND 201 216 204 COLOUR_TEXT_REGION 201 216 204 216 51 STRAND 210 216 212 COLOUR_TEXT_REGION 210 216 212 216 51 STRAND 217 216 221 COLOUR_TEXT_REGION 217 216 221 216 51 STRAND 228 216 231 COLOUR_TEXT_REGION 228 216 231 216 51 STRAND 237 216 238 COLOUR_TEXT_REGION 237 216 238 216 51 STRAND 241 216 245 COLOUR_TEXT_REGION 241 216 245 216 51 HELIX 5 216 26 COLOUR_TEXT_REGION 5 216 26 216 50 HELIX 31 216 49 COLOUR_TEXT_REGION 31 216 49 216 50 HELIX 67 216 70 COLOUR_TEXT_REGION 67 216 70 216 50 HELIX 75 216 80 COLOUR_TEXT_REGION 75 216 80 216 50 HELIX 93 216 102 COLOUR_TEXT_REGION 93 216 102 216 50 HELIX 164 216 174 COLOUR_TEXT_REGION 164 216 174 216 50