SILENT_MODE BLOCK_FILE jp_98rfXSH.concise.blc MAX_NSEQ 806 MAX_INPUT_LEN 808 OUTPUT_FILE jp_98rfXSH.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 243 795 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 796 243 805 H SPACE SUB_CHARS 1 796 243 805 E SPACE SUB_CHARS 1 796 243 805 - SPACE HELIX 2 799 8 COLOUR_TEXT_REGION 2 799 8 799 50 HELIX 14 799 47 COLOUR_TEXT_REGION 14 799 47 799 50 HELIX 53 799 80 COLOUR_TEXT_REGION 53 799 80 799 50 HELIX 86 799 93 COLOUR_TEXT_REGION 86 799 93 799 50 HELIX 108 799 132 COLOUR_TEXT_REGION 108 799 132 799 50 HELIX 138 799 146 COLOUR_TEXT_REGION 138 799 146 799 50 HELIX 149 799 159 COLOUR_TEXT_REGION 149 799 159 799 50 HELIX 162 799 188 COLOUR_TEXT_REGION 162 799 188 799 50 HELIX 202 799 216 COLOUR_TEXT_REGION 202 799 216 799 50 HELIX 225 799 241 COLOUR_TEXT_REGION 225 799 241 799 50 STRAND 152 804 158 COLOUR_TEXT_REGION 152 804 158 804 51 STRAND 238 804 241 COLOUR_TEXT_REGION 238 804 241 804 51 HELIX 2 804 8 COLOUR_TEXT_REGION 2 804 8 804 50 HELIX 14 804 47 COLOUR_TEXT_REGION 14 804 47 804 50 HELIX 53 804 80 COLOUR_TEXT_REGION 53 804 80 804 50 HELIX 86 804 93 COLOUR_TEXT_REGION 86 804 93 804 50 HELIX 106 804 132 COLOUR_TEXT_REGION 106 804 132 804 50 HELIX 139 804 145 COLOUR_TEXT_REGION 139 804 145 804 50 HELIX 151 804 151 COLOUR_TEXT_REGION 151 804 151 804 50 HELIX 163 804 188 COLOUR_TEXT_REGION 163 804 188 804 50 HELIX 202 804 217 COLOUR_TEXT_REGION 202 804 217 804 50 HELIX 225 804 237 COLOUR_TEXT_REGION 225 804 237 804 50 HELIX 2 805 7 COLOUR_TEXT_REGION 2 805 7 805 50 HELIX 15 805 47 COLOUR_TEXT_REGION 15 805 47 805 50 HELIX 53 805 81 COLOUR_TEXT_REGION 53 805 81 805 50 HELIX 86 805 93 COLOUR_TEXT_REGION 86 805 93 805 50 HELIX 110 805 118 COLOUR_TEXT_REGION 110 805 118 805 50 HELIX 120 805 132 COLOUR_TEXT_REGION 120 805 132 805 50 HELIX 137 805 146 COLOUR_TEXT_REGION 137 805 146 805 50 HELIX 148 805 187 COLOUR_TEXT_REGION 148 805 187 805 50 HELIX 203 805 215 COLOUR_TEXT_REGION 203 805 215 805 50 HELIX 225 805 242 COLOUR_TEXT_REGION 225 805 242 805 50