SILENT_MODE BLOCK_FILE jp_U_WcZZZ.concise.blc MAX_NSEQ 122 MAX_INPUT_LEN 124 OUTPUT_FILE jp_U_WcZZZ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 98 111 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 112 98 121 H SPACE SUB_CHARS 1 112 98 121 E SPACE SUB_CHARS 1 112 98 121 - SPACE STRAND 4 115 10 COLOUR_TEXT_REGION 4 115 10 115 51 STRAND 16 115 19 COLOUR_TEXT_REGION 16 115 19 115 51 STRAND 23 115 31 COLOUR_TEXT_REGION 23 115 31 115 51 STRAND 36 115 42 COLOUR_TEXT_REGION 36 115 42 115 51 STRAND 55 115 59 COLOUR_TEXT_REGION 55 115 59 115 51 STRAND 62 115 63 COLOUR_TEXT_REGION 62 115 63 115 51 STRAND 67 115 70 COLOUR_TEXT_REGION 67 115 70 115 51 STRAND 74 115 78 COLOUR_TEXT_REGION 74 115 78 115 51 STRAND 85 115 87 COLOUR_TEXT_REGION 85 115 87 115 51 HELIX 89 115 95 COLOUR_TEXT_REGION 89 115 95 115 50 STRAND 5 120 10 COLOUR_TEXT_REGION 5 120 10 120 51 STRAND 16 120 19 COLOUR_TEXT_REGION 16 120 19 120 51 STRAND 23 120 31 COLOUR_TEXT_REGION 23 120 31 120 51 STRAND 36 120 42 COLOUR_TEXT_REGION 36 120 42 120 51 STRAND 56 120 59 COLOUR_TEXT_REGION 56 120 59 120 51 STRAND 62 120 64 COLOUR_TEXT_REGION 62 120 64 120 51 STRAND 67 120 70 COLOUR_TEXT_REGION 67 120 70 120 51 STRAND 74 120 78 COLOUR_TEXT_REGION 74 120 78 120 51 STRAND 85 120 87 COLOUR_TEXT_REGION 85 120 87 120 51 HELIX 89 120 96 COLOUR_TEXT_REGION 89 120 96 120 50 STRAND 4 121 11 COLOUR_TEXT_REGION 4 121 11 121 51 STRAND 17 121 18 COLOUR_TEXT_REGION 17 121 18 121 51 STRAND 24 121 31 COLOUR_TEXT_REGION 24 121 31 121 51 STRAND 36 121 41 COLOUR_TEXT_REGION 36 121 41 121 51 STRAND 55 121 59 COLOUR_TEXT_REGION 55 121 59 121 51 STRAND 67 121 70 COLOUR_TEXT_REGION 67 121 70 121 51 STRAND 74 121 78 COLOUR_TEXT_REGION 74 121 78 121 51 STRAND 84 121 86 COLOUR_TEXT_REGION 84 121 86 121 51 HELIX 89 121 94 COLOUR_TEXT_REGION 89 121 94 121 50