SILENT_MODE BLOCK_FILE jp_HnKojQO.concise.blc MAX_NSEQ 778 MAX_INPUT_LEN 780 OUTPUT_FILE jp_HnKojQO.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 494 767 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 768 494 777 H SPACE SUB_CHARS 1 768 494 777 E SPACE SUB_CHARS 1 768 494 777 - SPACE STRAND 47 771 53 COLOUR_TEXT_REGION 47 771 53 771 51 STRAND 75 771 79 COLOUR_TEXT_REGION 75 771 79 771 51 STRAND 116 771 120 COLOUR_TEXT_REGION 116 771 120 771 51 STRAND 148 771 151 COLOUR_TEXT_REGION 148 771 151 771 51 STRAND 166 771 170 COLOUR_TEXT_REGION 166 771 170 771 51 STRAND 174 771 177 COLOUR_TEXT_REGION 174 771 177 771 51 STRAND 193 771 199 COLOUR_TEXT_REGION 193 771 199 771 51 STRAND 238 771 244 COLOUR_TEXT_REGION 238 771 244 771 51 STRAND 268 771 271 COLOUR_TEXT_REGION 268 771 271 771 51 STRAND 287 771 291 COLOUR_TEXT_REGION 287 771 291 771 51 STRAND 316 771 320 COLOUR_TEXT_REGION 316 771 320 771 51 STRAND 345 771 346 COLOUR_TEXT_REGION 345 771 346 771 51 STRAND 367 771 367 COLOUR_TEXT_REGION 367 771 367 771 51 STRAND 403 771 406 COLOUR_TEXT_REGION 403 771 406 771 51 STRAND 412 771 414 COLOUR_TEXT_REGION 412 771 414 771 51 STRAND 420 771 422 COLOUR_TEXT_REGION 420 771 422 771 51 HELIX 3 771 16 COLOUR_TEXT_REGION 3 771 16 771 50 HELIX 21 771 39 COLOUR_TEXT_REGION 21 771 39 771 50 HELIX 59 771 70 COLOUR_TEXT_REGION 59 771 70 771 50 HELIX 86 771 97 COLOUR_TEXT_REGION 86 771 97 771 50 HELIX 132 771 143 COLOUR_TEXT_REGION 132 771 143 771 50 HELIX 213 771 216 COLOUR_TEXT_REGION 213 771 216 771 50 HELIX 218 771 222 COLOUR_TEXT_REGION 218 771 222 771 50 HELIX 252 771 264 COLOUR_TEXT_REGION 252 771 264 771 50 HELIX 277 771 282 COLOUR_TEXT_REGION 277 771 282 771 50 HELIX 303 771 309 COLOUR_TEXT_REGION 303 771 309 771 50 HELIX 327 771 339 COLOUR_TEXT_REGION 327 771 339 771 50 HELIX 372 771 378 COLOUR_TEXT_REGION 372 771 378 771 50 HELIX 385 771 399 COLOUR_TEXT_REGION 385 771 399 771 50 HELIX 436 771 448 COLOUR_TEXT_REGION 436 771 448 771 50 HELIX 452 771 472 COLOUR_TEXT_REGION 452 771 472 771 50 HELIX 479 771 492 COLOUR_TEXT_REGION 479 771 492 771 50 STRAND 47 776 53 COLOUR_TEXT_REGION 47 776 53 776 51 STRAND 75 776 79 COLOUR_TEXT_REGION 75 776 79 776 51 STRAND 116 776 121 COLOUR_TEXT_REGION 116 776 121 776 51 STRAND 148 776 151 COLOUR_TEXT_REGION 148 776 151 776 51 STRAND 169 776 171 COLOUR_TEXT_REGION 169 776 171 776 51 STRAND 173 776 178 COLOUR_TEXT_REGION 173 776 178 776 51 STRAND 193 776 199 COLOUR_TEXT_REGION 193 776 199 776 51 STRAND 238 776 244 COLOUR_TEXT_REGION 238 776 244 776 51 STRAND 267 776 272 COLOUR_TEXT_REGION 267 776 272 776 51 STRAND 287 776 290 COLOUR_TEXT_REGION 287 776 290 776 51 STRAND 316 776 320 COLOUR_TEXT_REGION 316 776 320 776 51 STRAND 344 776 347 COLOUR_TEXT_REGION 344 776 347 776 51 STRAND 367 776 368 COLOUR_TEXT_REGION 367 776 368 776 51 STRAND 403 776 406 COLOUR_TEXT_REGION 403 776 406 776 51 STRAND 411 776 414 COLOUR_TEXT_REGION 411 776 414 776 51 STRAND 419 776 423 COLOUR_TEXT_REGION 419 776 423 776 51 HELIX 3 776 16 COLOUR_TEXT_REGION 3 776 16 776 50 HELIX 21 776 39 COLOUR_TEXT_REGION 21 776 39 776 50 HELIX 59 776 70 COLOUR_TEXT_REGION 59 776 70 776 50 HELIX 86 776 97 COLOUR_TEXT_REGION 86 776 97 776 50 HELIX 132 776 143 COLOUR_TEXT_REGION 132 776 143 776 50 HELIX 213 776 223 COLOUR_TEXT_REGION 213 776 223 776 50 HELIX 252 776 264 COLOUR_TEXT_REGION 252 776 264 776 50 HELIX 277 776 282 COLOUR_TEXT_REGION 277 776 282 776 50 HELIX 304 776 310 COLOUR_TEXT_REGION 304 776 310 776 50 HELIX 327 776 339 COLOUR_TEXT_REGION 327 776 339 776 50 HELIX 372 776 378 COLOUR_TEXT_REGION 372 776 378 776 50 HELIX 385 776 399 COLOUR_TEXT_REGION 385 776 399 776 50 HELIX 435 776 447 COLOUR_TEXT_REGION 435 776 447 776 50 HELIX 452 776 472 COLOUR_TEXT_REGION 452 776 472 776 50 HELIX 479 776 492 COLOUR_TEXT_REGION 479 776 492 776 50 STRAND 47 777 53 COLOUR_TEXT_REGION 47 777 53 777 51 STRAND 74 777 79 COLOUR_TEXT_REGION 74 777 79 777 51 STRAND 148 777 151 COLOUR_TEXT_REGION 148 777 151 777 51 STRAND 165 777 170 COLOUR_TEXT_REGION 165 777 170 777 51 STRAND 184 777 184 COLOUR_TEXT_REGION 184 777 184 777 51 STRAND 194 777 199 COLOUR_TEXT_REGION 194 777 199 777 51 STRAND 239 777 245 COLOUR_TEXT_REGION 239 777 245 777 51 STRAND 287 777 291 COLOUR_TEXT_REGION 287 777 291 777 51 STRAND 316 777 320 COLOUR_TEXT_REGION 316 777 320 777 51 STRAND 403 777 407 COLOUR_TEXT_REGION 403 777 407 777 51 HELIX 3 777 16 COLOUR_TEXT_REGION 3 777 16 777 50 HELIX 21 777 39 COLOUR_TEXT_REGION 21 777 39 777 50 HELIX 60 777 69 COLOUR_TEXT_REGION 60 777 69 777 50 HELIX 86 777 98 COLOUR_TEXT_REGION 86 777 98 777 50 HELIX 132 777 143 COLOUR_TEXT_REGION 132 777 143 777 50 HELIX 254 777 264 COLOUR_TEXT_REGION 254 777 264 777 50 HELIX 268 777 270 COLOUR_TEXT_REGION 268 777 270 777 50 HELIX 276 777 281 COLOUR_TEXT_REGION 276 777 281 777 50 HELIX 301 777 309 COLOUR_TEXT_REGION 301 777 309 777 50 HELIX 326 777 339 COLOUR_TEXT_REGION 326 777 339 777 50 HELIX 373 777 378 COLOUR_TEXT_REGION 373 777 378 777 50 HELIX 386 777 399 COLOUR_TEXT_REGION 386 777 399 777 50 HELIX 438 777 472 COLOUR_TEXT_REGION 438 777 472 777 50 HELIX 479 777 492 COLOUR_TEXT_REGION 479 777 492 777 50