QUERY           : ASRYLTDMTLEEMSRDWSMLIPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTAEDVKNAVGVLIGGLEANDNTVRVSETLQRFAW : QUERY 
UniRef90_B6ZIB2 : ASRYITEMTLEEMSRDWFMLMPKQKMTGPFCIRMDQAIMDKNITLKANFSVIFDRLETLILLRAFTEGGAIVGEISPLPSLPGHSDEDVKDAIGVLIKGFKWNNNTVRVSEALQRFAW : UniRef90_B6ZIB2
UniRef90_D1LKL1 : APRYITDMSIEEISREWYMLMPRQKITGGLMVKMDQAIMDKRIILKANFSVLFDQLETLVSLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGVLIGGLEWNDNTVRVSETLQRFTW : UniRef90_D1LKL1
UniRef90_B6CAT3 : APRYLADMTLEEMSRDWFMLLPRQKITGSLCVRMDQAIMGKNITLKANFSVIFNRLETLILLRAFTEEEAIVGEISSLPSLPGHTGEDVENAVGVLIRGFEWNGNTVRVSENLQRFAW : UniRef90_B6CAT3
UniRef90_F2VSD1 : SSRYLTDMTLEEMARDWFMVMPKQKVTGSLCIKMDQAIMDKHIILKANFSVINDRLETLILLRAFTEEGTIVGEISPLPSLPGHTNEDVKNAIGGPIGGLEWNGNPGRRFEKITRFAW : UniRef90_F2VSD1
UniRef90_O92551 : TSYYLTDMTLEEMSRAWFMLIPNQKRVGSLCIRMDQAIMDKEITLKANFSVVFNKLETLTLLRAFTDDEAIIGEILPIPSLPGHTNEDVKNAIEILIGGLEWNNNTVRISEILQRFTW : UniRef90_O92551
UniRef90_H8P9B8 : APRYITDMSIEEITREWFMLMPRQKVTGGLSVKMDQAIMDKRIILKANFSVIFNRLETLVSLRAFTEEGAIVGEISPIPFIPGLSTGEFKNANGVLLGGTERKDNTVRVSENIQRFAW : UniRef90_H8P9B8
UniRef90_B7SB84 : ASRYLSDMTLEEMSRDWFMLMPKQKVAGSLCIRMDQAIMDKTIILKANFSVIFERLDALILLRAFTEEGAIVGEISPLPSLPGHTEEDVKNAIGVLIGGL------------------ : UniRef90_B7SB84
UniRef90_A4K0J0 : ASRYLTDMTLEEMSRDWFMLMPKQKVAGSLY-----------------------RLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGVLIGGFEWNDNTVRVSETLQRFAW : UniRef90_A4K0J0
UniRef90_K9NXS5 : ASRYITDMTIEELSRNWFMLXXXXXXXXXXXXXMDQAIMEKNIILKANXXXXXXXXXXXTLLRAFTEEGAIVGEISPLPSFPGHTNEDVKNAIGVLIGGLEWNDNTVRVSEXIQRFAW : UniRef90_K9NXS5
UniRef90_H6QM79 : -PKYITEMTQEETIRNWVMIQPKQKVIGRILISMDQAVTNKVLTIKANFTVCFGKLERLVLARAFTEEGTVVGEINPLSFVTGHTGEDVKTAYELFRSGFEWNDNTIDESQILQRLA- : UniRef90_H6QM79
UniRef90_Q91U17 : --------------------------------RMDQAIMDNDIILKANFSVIFNRLEALILLRAFTDEGAIVGEISPLPSLPGHTEEDVKNAIGVLIGGLEWNDNTVRVSETLQRFTW : UniRef90_Q91U17
UniRef90_Q9E2Y7 : TSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMDQAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSL------------------------------------- : UniRef90_Q9E2Y7
UniRef90_K4J1Q1 : ASRYLTDMTIEELSRDWFMLMPKQKVEGPLCIRIDQAII-------------------------------------------GHTIEDVKNAIGVLIGGLEWNDNTVRVSKTLQRFAW : UniRef90_K4J1Q1
UniRef90_B1AHS5 : -----------------------------------------------NFSILFDQLETLVSLRAFTEDGAIVAEISPIPSMPGHSTEDVKNAIGILIGGLEWNDNSIRASENIQRFAW : UniRef90_B1AHS5

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111----- :
OrigSeq         : ASRYLTDMTLEEMSRDWSMLIPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTAEDVKNAVGVLIGGLEANDNTVRVSETLQRFAW : OrigSeq

Jnet            : ----HHH-HHHHHHHHHHH----HHHHHHHHHHHHHHHH---EEE----HHHHHHHHHHHHHH-------EEEE------------HHHHHHHHHHHH--------HHHHHHHHHH-- : Jnet
jhmm            : ----HHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHH---EEE---HHHHHHHHHHHHHHHH------EEEEE-----------HHHHHHHHHHHHH-------HHHHHHHHHH-- : jhmm
jpssm           : ---------HHHHHHHHHHH----EEE--HHHHHHHHHH---EEE----EEE--HHHHHHHHH-------HH--------------HHHHHHHHEEE---------HHHHHHHH---- : jpssm

Lupas 14        : ---------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21        : ---------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28        : ---------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25         : ---BB--BBB--B---BBBBBB---B-B-BBB-BB-BBB---BBBBBBB-BBB--B--BBBBBBB---BBBBBBB-BB--B-B-B---B--BBBBBB-BB-B----B-BB--B--B-- : Jnet_25
Jnet_5          : ----------------BB-B---------B-B-B--------B-B-B-B--B------BBBB------------B-------------B--B--BB--B------------------- : Jnet_5
Jnet_0          : ---------------------------------------------------------------------------------------------------------------------- : Jnet_0
Jnet Rel        : 9977010125565352532058114443334566456412533424771333430789987620787641122205677777776502343431542126578751578898734189 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.