SILENT_MODE
BLOCK_FILE jp_Oe7_Eod.concise.blc
MAX_NSEQ 363
MAX_INPUT_LEN 365
OUTPUT_FILE jp_Oe7_Eod.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 81 352   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 353 81 362 H SPACE
SUB_CHARS 1 353 81 362 E SPACE
SUB_CHARS 1 353 81 362 - SPACE
STRAND 3 356 7
COLOUR_TEXT_REGION 3 356 7 356 51
STRAND 12 356 16
COLOUR_TEXT_REGION 12 356 16 356 51
STRAND 21 356 27
COLOUR_TEXT_REGION 21 356 27 356 51
STRAND 31 356 36
COLOUR_TEXT_REGION 31 356 36 356 51
STRAND 40 356 41
COLOUR_TEXT_REGION 40 356 41 356 51
STRAND 53 356 60
COLOUR_TEXT_REGION 53 356 60 356 51
STRAND 65 356 70
COLOUR_TEXT_REGION 65 356 70 356 51
STRAND 74 356 80
COLOUR_TEXT_REGION 74 356 80 356 51
STRAND 3 361 7
COLOUR_TEXT_REGION 3 361 7 361 51
STRAND 12 361 16
COLOUR_TEXT_REGION 12 361 16 361 51
STRAND 21 361 27
COLOUR_TEXT_REGION 21 361 27 361 51
STRAND 31 361 36
COLOUR_TEXT_REGION 31 361 36 361 51
STRAND 47 361 48
COLOUR_TEXT_REGION 47 361 48 361 51
STRAND 53 361 60
COLOUR_TEXT_REGION 53 361 60 361 51
STRAND 65 361 70
COLOUR_TEXT_REGION 65 361 70 361 51
STRAND 74 361 79
COLOUR_TEXT_REGION 74 361 79 361 51
STRAND 3 362 7
COLOUR_TEXT_REGION 3 362 7 362 51
STRAND 12 362 16
COLOUR_TEXT_REGION 12 362 16 362 51
STRAND 21 362 27
COLOUR_TEXT_REGION 21 362 27 362 51
STRAND 32 362 37
COLOUR_TEXT_REGION 32 362 37 362 51
STRAND 39 362 42
COLOUR_TEXT_REGION 39 362 42 362 51
STRAND 59 362 60
COLOUR_TEXT_REGION 59 362 60 362 51
STRAND 65 362 70
COLOUR_TEXT_REGION 65 362 70 362 51
STRAND 74 362 80
COLOUR_TEXT_REGION 74 362 80 362 51