JALVIEW_ANNOTATION # Created by concise2jalview using 'jp_cuRub7H.concise' as input NO_GRAPH Lupas_21 Coiled-coil prediction windowed over 21 residues 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NO_GRAPH Lupas_14 Coiled-coil prediction windowed over 14 residues 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NO_GRAPH Lupas_28 Coiled-coil prediction windowed over 28 residues 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NO_GRAPH jnetpred Final secondary structure prediction by Jnet ||H|H|H|H|H|H||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||E|E|E|E|||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||||||H|H|H|H|H|H|H|H|H|H|H||||H|H||E|E|E|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||H||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||H|H|H||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||E|E|E|E|||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||||||||||E|E|E||||||||||||||||E|E|||H|H|H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|H||||||||||| BAR_GRAPH JNETCONF Confidence of Jnet prediction 0 (low) -> 9 (high) 5|2|8|8|6|4|3|0|2|4|4|6|6|8|8|8|9|9|9|9|9|9|9|9|9|9|8|6|1|3|2|1|4|5|4|1|3|6|7|7|7|5|1|3|6|7|6|6|1|0|6|6|3|0|1|1|7|6|4|4|5|8|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|8|6|0|2|1|7|8|8|7|6|3|4|5|8|9|9|9|9|9|9|9|9|9|9|9|9|9|9|8|7|6|3|3|0|2|8|8|5|2|4|5|4|2|3|5|6|6|7|7|7|5|2|2|5|5|4|1|3|7|7|6|6|4|3|1|1|1|1|2|6|8|9|9|9|9|9|9|9|9|8|5|1|6|7|8|8|8|7|6|2|7|8|9|9|9|9|9|9|9|9|9|9|8|7|4|3|4|3|7|9|9|9|8|7|6|1|0|7|7|7|7|7|7|7|7|7|6|5|2|7|8|9|9|9|9|9|9|8|6|2|4|6|2|1|1|1|1|1|1|2|3|2|0|3|4|7|6|8|9|9|9|9|9|3|0|0|0|1|2|3|3|2|2|2|2|3|3|3|2|2|3|2|2|3|3|2|2|1|1|1|1|1|1|0|2|7|7|7|7|7|1|1|1|1|2|2|2|2|3|4|3|7|9|9|9|9|4|9|9|9|9|9|9|9|9|9|9|9|8|7|1|1|5|3|3|3|5|6|6|1|4|2|2|3|1|4|3|2|2|2|3|3|1|3|2|3|4|4|6|8|8|7|7|8|8|6|2|1|0|0|0|1|2|1|0|0|2|7|7|5|3|1|1|1|1|6|7|7|3|2|2|3|0|1|2|4|7|8|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|8|7|5|1|7|8|1|1|2|2|4|3|6|7|7|8|7|6|6|5|5|6|7|8|8|8|7|7|7|5|3|8|9|9|9|9|8|8|5|1|6|7|8|7|0|0|2|3|0|7|7|8|7|7|6|4|3|0|8|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|9|8|5|1|5|7|7|7|7|7|7|7|7|7|7|7|6|3|2|2|1|6|7|7|7|7|6|6|6|6|5|3|5|7|7|1|2|0|3|1|0|3|8|8|9|9|9|9|8|6|1|5|7|6|1|2|2|3|3|0|0|6|7|7|7|7|7|7|7|8|8|9 NO_GRAPH JNETSOL25 Jnet solvent relative accessibility prediction at 25% cut-off -|-|B|B|-|-|B|-|-|-|-|B|B|B|B|B|B|B|B|B|B|-|-|B|B|B|B|B|-|B|B|-|B|B|B|B|B|B|B|B|B|-|B|B|-|B|B|-|-|-|B|B|B|B|-|B|B|B|-|B|B|B|B|B|B|-|B|B|B|-|B|B|B|-|-|B|-|B|B|B|B|B|B|B|B|B|-|-|B|-|-|-|B|-|B|-|B|B|B|B|B|B|-|B|B|-|-|B|-|-|B|B|-|B|B|B|B|-|B|-|B|B|B|B|B|B|B|B|B|B|B|-|B|B|B|B|B|B|-|B|B|B|-|B|B|-|B|B|B|-|B|B|-|B|B|B|-|B|B|B|-|B|-|-|-|-|-|-|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|B|B|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|-|B|-|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|B|B|B|B|B|B|B|B|B|B|B|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|B|B|B|B|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|B|-|-|-|-|-|B|-|B|B|B|B|B|B|B|B|B|-|-|-|-|B|-|-|-|-|B|B|B|B|B|B|B|B|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|-|B|-|-|B|B|-|B|B|B|B|B|B|B|-|B|B|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|B|B|B|B|B|B|B|B|B|B|-|B|B|-|B|B|-|-|B|B|-|B|-|B|-|B|B|B|B|B|B|B|B|B|B|-|-|-|-|B|-|-|-|B|-|-|B|B|B|B|B|B|B|B|B|B|B|B|-|-|-|B|B|-|-|B|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|B|B|B|-|B|-|-|-|B|B|-|-|-|- NO_GRAPH JNETSOL5 Jnet solvent relative accessibility prediction at 5% cut-off -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|-|-|B|-|-|B|B|-|-|-|-|-|-|B|B|-|B|B|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|B|B|B|-|-|-|-|-|-|B|B|-|-|B|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|-|-|-|B|B|-|B|B|B|-|-|B|-|-|-|-|-|-|-|-|B|B|B|-|B|B|-|-|B|-|-|-|B|-|-|-|B|B|-|B|B|B|B|B|-|B|-|-|-|-|-|-|-|-|B|-|-|B|B|-|-|B|-|-|-|-|-|-|-|-|B|B|B|-|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|B|-|-|-|-|-|-|-|-|-|-|-|-|B|B|-|-|B|-|B|B|-|B|B|B|-|B|B|-|-|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|-|B|B|B|B|B|B|B|-|B|-|-|-|-|B|-|-|-|B|-|B|B|B|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|-|B|B|-|-|-|-|-|-|-|-|-|-|-|-|B|-|B|-|-|-|-|B|B|-|-|B|B|B|B|B|-|-|-|-|-|-|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETSOL0 Jnet solvent relative accessibility prediction at 0% cut-off -|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETHMM Jnet prediction using HMMer profiles ||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||H|H|H|H|H|H|H|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||||||H|H|H|H|H|H|H|H|H|H|H||||H|H|E|E|E|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||H|H|H|H|H|H|H|H|H|H|H|H|H||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||H|H|H|H|H|H|H|||||H|H|H|H||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||E|E|E|E|E||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||||||||||E|E|E|||||||||||||||E|E|E|E|H|H|H|H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|H||||||||||| NO_GRAPH JNETPSSM Jnet prediction using PSSM profiles |H|H|H|H|H|||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||H|H|H|H|H|||||||H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||E|E|E|E|E||||||||||H|H|H|H|H|H|H|H|H|H|H|||||||H|H|H|H|H|H|H|H|H|H|H|H||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||H|H|H|H|H|H|H|H||||||||||||||H|H|H|H|H|H|H|H|H|H|H|||||||H|H|E|E|||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||E|E|E||||||||||||||||||||||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||||H|H|H|H||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|E||||||||||E|E|||||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||E|E||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||||||||||E|E|||||||||||||||||||||H|H|H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|||||||||||| NO_GRAPH JNETJURY Positions where Jnet predictions do not agree |*| | | | |*|*|*|*| | | | | | | | | | 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