SILENT_MODE BLOCK_FILE jp_qzKk2v0.concise.blc MAX_NSEQ 579 MAX_INPUT_LEN 581 OUTPUT_FILE jp_qzKk2v0.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 715 568 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 569 715 578 H SPACE SUB_CHARS 1 569 715 578 E SPACE SUB_CHARS 1 569 715 578 - SPACE STRAND 4 572 5 COLOUR_TEXT_REGION 4 572 5 572 51 STRAND 9 572 11 COLOUR_TEXT_REGION 9 572 11 572 51 STRAND 97 572 101 COLOUR_TEXT_REGION 97 572 101 572 51 STRAND 116 572 119 COLOUR_TEXT_REGION 116 572 119 572 51 STRAND 190 572 193 COLOUR_TEXT_REGION 190 572 193 572 51 STRAND 229 572 233 COLOUR_TEXT_REGION 229 572 233 572 51 STRAND 239 572 241 COLOUR_TEXT_REGION 239 572 241 572 51 STRAND 266 572 270 COLOUR_TEXT_REGION 266 572 270 572 51 STRAND 326 572 331 COLOUR_TEXT_REGION 326 572 331 572 51 STRAND 341 572 343 COLOUR_TEXT_REGION 341 572 343 572 51 STRAND 383 572 386 COLOUR_TEXT_REGION 383 572 386 572 51 STRAND 415 572 421 COLOUR_TEXT_REGION 415 572 421 572 51 STRAND 530 572 530 COLOUR_TEXT_REGION 530 572 530 572 51 HELIX 13 572 22 COLOUR_TEXT_REGION 13 572 22 572 50 HELIX 31 572 68 COLOUR_TEXT_REGION 31 572 68 572 50 HELIX 77 572 86 COLOUR_TEXT_REGION 77 572 86 572 50 HELIX 106 572 110 COLOUR_TEXT_REGION 106 572 110 572 50 HELIX 122 572 131 COLOUR_TEXT_REGION 122 572 131 572 50 HELIX 133 572 141 COLOUR_TEXT_REGION 133 572 141 572 50 HELIX 161 572 179 COLOUR_TEXT_REGION 161 572 179 572 50 HELIX 186 572 189 COLOUR_TEXT_REGION 186 572 189 572 50 HELIX 197 572 204 COLOUR_TEXT_REGION 197 572 204 572 50 HELIX 208 572 211 COLOUR_TEXT_REGION 208 572 211 572 50 HELIX 253 572 262 COLOUR_TEXT_REGION 253 572 262 572 50 HELIX 281 572 294 COLOUR_TEXT_REGION 281 572 294 572 50 HELIX 299 572 301 COLOUR_TEXT_REGION 299 572 301 572 50 HELIX 351 572 368 COLOUR_TEXT_REGION 351 572 368 572 50 HELIX 372 572 377 COLOUR_TEXT_REGION 372 572 377 572 50 HELIX 392 572 409 COLOUR_TEXT_REGION 392 572 409 572 50 HELIX 425 572 444 COLOUR_TEXT_REGION 425 572 444 572 50 HELIX 450 572 460 COLOUR_TEXT_REGION 450 572 460 572 50 HELIX 476 572 491 COLOUR_TEXT_REGION 476 572 491 572 50 HELIX 506 572 524 COLOUR_TEXT_REGION 506 572 524 572 50 HELIX 536 572 546 COLOUR_TEXT_REGION 536 572 546 572 50 HELIX 554 572 554 COLOUR_TEXT_REGION 554 572 554 572 50 HELIX 564 572 569 COLOUR_TEXT_REGION 564 572 569 572 50 HELIX 582 572 603 COLOUR_TEXT_REGION 582 572 603 572 50 HELIX 623 572 638 COLOUR_TEXT_REGION 623 572 638 572 50 HELIX 648 572 668 COLOUR_TEXT_REGION 648 572 668 572 50 HELIX 676 572 690 COLOUR_TEXT_REGION 676 572 690 572 50 HELIX 699 572 712 COLOUR_TEXT_REGION 699 572 712 572 50 STRAND 4 577 6 COLOUR_TEXT_REGION 4 577 6 577 51 STRAND 9 577 11 COLOUR_TEXT_REGION 9 577 11 577 51 STRAND 97 577 101 COLOUR_TEXT_REGION 97 577 101 577 51 STRAND 116 577 118 COLOUR_TEXT_REGION 116 577 118 577 51 STRAND 231 577 233 COLOUR_TEXT_REGION 231 577 233 577 51 STRAND 266 577 270 COLOUR_TEXT_REGION 266 577 270 577 51 STRAND 299 577 300 COLOUR_TEXT_REGION 299 577 300 577 51 STRAND 326 577 331 COLOUR_TEXT_REGION 326 577 331 577 51 STRAND 383 577 386 COLOUR_TEXT_REGION 383 577 386 577 51 STRAND 415 577 421 COLOUR_TEXT_REGION 415 577 421 577 51 STRAND 491 577 491 COLOUR_TEXT_REGION 491 577 491 577 51 STRAND 529 577 531 COLOUR_TEXT_REGION 529 577 531 577 51 STRAND 607 577 609 COLOUR_TEXT_REGION 607 577 609 577 51 STRAND 619 577 621 COLOUR_TEXT_REGION 619 577 621 577 51 HELIX 13 577 23 COLOUR_TEXT_REGION 13 577 23 577 50 HELIX 31 577 68 COLOUR_TEXT_REGION 31 577 68 577 50 HELIX 77 577 86 COLOUR_TEXT_REGION 77 577 86 577 50 HELIX 106 577 111 COLOUR_TEXT_REGION 106 577 111 577 50 HELIX 123 577 134 COLOUR_TEXT_REGION 123 577 134 577 50 HELIX 137 577 140 COLOUR_TEXT_REGION 137 577 140 577 50 HELIX 161 577 180 COLOUR_TEXT_REGION 161 577 180 577 50 HELIX 186 577 192 COLOUR_TEXT_REGION 186 577 192 577 50 HELIX 196 577 211 COLOUR_TEXT_REGION 196 577 211 577 50 HELIX 253 577 261 COLOUR_TEXT_REGION 253 577 261 577 50 HELIX 281 577 294 COLOUR_TEXT_REGION 281 577 294 577 50 HELIX 351 577 368 COLOUR_TEXT_REGION 351 577 368 577 50 HELIX 372 577 377 COLOUR_TEXT_REGION 372 577 377 577 50 HELIX 392 577 408 COLOUR_TEXT_REGION 392 577 408 577 50 HELIX 425 577 444 COLOUR_TEXT_REGION 425 577 444 577 50 HELIX 453 577 459 COLOUR_TEXT_REGION 453 577 459 577 50 HELIX 465 577 467 COLOUR_TEXT_REGION 465 577 467 577 50 HELIX 476 577 485 COLOUR_TEXT_REGION 476 577 485 577 50 HELIX 506 577 524 COLOUR_TEXT_REGION 506 577 524 577 50 HELIX 536 577 546 COLOUR_TEXT_REGION 536 577 546 577 50 HELIX 564 577 568 COLOUR_TEXT_REGION 564 577 568 577 50 HELIX 582 577 602 COLOUR_TEXT_REGION 582 577 602 577 50 HELIX 623 577 638 COLOUR_TEXT_REGION 623 577 638 577 50 HELIX 651 577 664 COLOUR_TEXT_REGION 651 577 664 577 50 HELIX 678 577 690 COLOUR_TEXT_REGION 678 577 690 577 50 HELIX 699 577 711 COLOUR_TEXT_REGION 699 577 711 577 50 STRAND 4 578 5 COLOUR_TEXT_REGION 4 578 5 578 51 STRAND 10 578 11 COLOUR_TEXT_REGION 10 578 11 578 51 STRAND 90 578 91 COLOUR_TEXT_REGION 90 578 91 578 51 STRAND 97 578 100 COLOUR_TEXT_REGION 97 578 100 578 51 STRAND 116 578 120 COLOUR_TEXT_REGION 116 578 120 578 51 STRAND 187 578 194 COLOUR_TEXT_REGION 187 578 194 578 51 STRAND 198 578 203 COLOUR_TEXT_REGION 198 578 203 578 51 STRAND 210 578 211 COLOUR_TEXT_REGION 210 578 211 578 51 STRAND 227 578 232 COLOUR_TEXT_REGION 227 578 232 578 51 STRAND 238 578 242 COLOUR_TEXT_REGION 238 578 242 578 51 STRAND 267 578 270 COLOUR_TEXT_REGION 267 578 270 578 51 STRAND 311 578 311 COLOUR_TEXT_REGION 311 578 311 578 51 STRAND 319 578 320 COLOUR_TEXT_REGION 319 578 320 578 51 STRAND 326 578 330 COLOUR_TEXT_REGION 326 578 330 578 51 STRAND 341 578 344 COLOUR_TEXT_REGION 341 578 344 578 51 STRAND 383 578 386 COLOUR_TEXT_REGION 383 578 386 578 51 STRAND 415 578 422 COLOUR_TEXT_REGION 415 578 422 578 51 STRAND 444 578 445 COLOUR_TEXT_REGION 444 578 445 578 51 HELIX 13 578 21 COLOUR_TEXT_REGION 13 578 21 578 50 HELIX 31 578 45 COLOUR_TEXT_REGION 31 578 45 578 50 HELIX 47 578 68 COLOUR_TEXT_REGION 47 578 68 578 50 HELIX 77 578 86 COLOUR_TEXT_REGION 77 578 86 578 50 HELIX 105 578 109 COLOUR_TEXT_REGION 105 578 109 578 50 HELIX 122 578 128 COLOUR_TEXT_REGION 122 578 128 578 50 HELIX 133 578 142 COLOUR_TEXT_REGION 133 578 142 578 50 HELIX 161 578 175 COLOUR_TEXT_REGION 161 578 175 578 50 HELIX 253 578 262 COLOUR_TEXT_REGION 253 578 262 578 50 HELIX 283 578 295 COLOUR_TEXT_REGION 283 578 295 578 50 HELIX 299 578 305 COLOUR_TEXT_REGION 299 578 305 578 50 HELIX 351 578 368 COLOUR_TEXT_REGION 351 578 368 578 50 HELIX 373 578 377 COLOUR_TEXT_REGION 373 578 377 578 50 HELIX 392 578 409 COLOUR_TEXT_REGION 392 578 409 578 50 HELIX 425 578 443 COLOUR_TEXT_REGION 425 578 443 578 50 HELIX 450 578 460 COLOUR_TEXT_REGION 450 578 460 578 50 HELIX 473 578 491 COLOUR_TEXT_REGION 473 578 491 578 50 HELIX 507 578 523 COLOUR_TEXT_REGION 507 578 523 578 50 HELIX 537 578 546 COLOUR_TEXT_REGION 537 578 546 578 50 HELIX 552 578 557 COLOUR_TEXT_REGION 552 578 557 578 50 HELIX 564 578 569 COLOUR_TEXT_REGION 564 578 569 578 50 HELIX 583 578 603 COLOUR_TEXT_REGION 583 578 603 578 50 HELIX 624 578 638 COLOUR_TEXT_REGION 624 578 638 578 50 HELIX 647 578 669 COLOUR_TEXT_REGION 647 578 669 578 50 HELIX 675 578 691 COLOUR_TEXT_REGION 675 578 691 578 50 HELIX 700 578 713 COLOUR_TEXT_REGION 700 578 713 578 50