SILENT_MODE
BLOCK_FILE jp_157yk6n.concise.blc
MAX_NSEQ 107
MAX_INPUT_LEN 109
OUTPUT_FILE jp_157yk6n.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 112 96   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 97 112 106 H SPACE
SUB_CHARS 1 97 112 106 E SPACE
SUB_CHARS 1 97 112 106 - SPACE
STRAND 76 100 80
COLOUR_TEXT_REGION 76 100 80 100 51
HELIX 4 100 17
COLOUR_TEXT_REGION 4 100 17 100 50
HELIX 23 100 37
COLOUR_TEXT_REGION 23 100 37 100 50
HELIX 41 100 51
COLOUR_TEXT_REGION 41 100 51 100 50
HELIX 56 100 62
COLOUR_TEXT_REGION 56 100 62 100 50
HELIX 84 100 97
COLOUR_TEXT_REGION 84 100 97 100 50
HELIX 102 100 110
COLOUR_TEXT_REGION 102 100 110 100 50
STRAND 76 105 80
COLOUR_TEXT_REGION 76 105 80 105 51
HELIX 4 105 12
COLOUR_TEXT_REGION 4 105 12 105 50
HELIX 23 105 37
COLOUR_TEXT_REGION 23 105 37 105 50
HELIX 40 105 48
COLOUR_TEXT_REGION 40 105 48 105 50
HELIX 56 105 62
COLOUR_TEXT_REGION 56 105 62 105 50
HELIX 84 105 98
COLOUR_TEXT_REGION 84 105 98 105 50
HELIX 102 105 110
COLOUR_TEXT_REGION 102 105 110 105 50
STRAND 76 106 80
COLOUR_TEXT_REGION 76 106 80 106 51
HELIX 4 106 18
COLOUR_TEXT_REGION 4 106 18 106 50
HELIX 23 106 37
COLOUR_TEXT_REGION 23 106 37 106 50
HELIX 42 106 52
COLOUR_TEXT_REGION 42 106 52 106 50
HELIX 56 106 62
COLOUR_TEXT_REGION 56 106 62 106 50
HELIX 84 106 97
COLOUR_TEXT_REGION 84 106 97 106 50
HELIX 102 106 110
COLOUR_TEXT_REGION 102 106 110 106 50