SILENT_MODE BLOCK_FILE jp_z0_25Ya.concise.blc MAX_NSEQ 798 MAX_INPUT_LEN 800 OUTPUT_FILE jp_z0_25Ya.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 235 787 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 788 235 797 H SPACE SUB_CHARS 1 788 235 797 E SPACE SUB_CHARS 1 788 235 797 - SPACE STRAND 129 791 134 COLOUR_TEXT_REGION 129 791 134 791 51 STRAND 148 791 153 COLOUR_TEXT_REGION 148 791 153 791 51 STRAND 157 791 168 COLOUR_TEXT_REGION 157 791 168 791 51 STRAND 174 791 182 COLOUR_TEXT_REGION 174 791 182 791 51 STRAND 186 791 192 COLOUR_TEXT_REGION 186 791 192 791 51 STRAND 198 791 201 COLOUR_TEXT_REGION 198 791 201 791 51 STRAND 216 791 219 COLOUR_TEXT_REGION 216 791 219 791 51 STRAND 223 791 224 COLOUR_TEXT_REGION 223 791 224 791 51 HELIX 18 791 44 COLOUR_TEXT_REGION 18 791 44 791 50 HELIX 50 791 59 COLOUR_TEXT_REGION 50 791 59 791 50 HELIX 76 791 89 COLOUR_TEXT_REGION 76 791 89 791 50 HELIX 95 791 111 COLOUR_TEXT_REGION 95 791 111 791 50 HELIX 114 791 122 COLOUR_TEXT_REGION 114 791 122 791 50 HELIX 124 791 124 COLOUR_TEXT_REGION 124 791 124 791 50 STRAND 129 796 134 COLOUR_TEXT_REGION 129 796 134 796 51 STRAND 148 796 153 COLOUR_TEXT_REGION 148 796 153 796 51 STRAND 157 796 167 COLOUR_TEXT_REGION 157 796 167 796 51 STRAND 175 796 182 COLOUR_TEXT_REGION 175 796 182 796 51 STRAND 186 796 191 COLOUR_TEXT_REGION 186 796 191 796 51 STRAND 198 796 200 COLOUR_TEXT_REGION 198 796 200 796 51 STRAND 216 796 219 COLOUR_TEXT_REGION 216 796 219 796 51 STRAND 223 796 224 COLOUR_TEXT_REGION 223 796 224 796 51 HELIX 18 796 44 COLOUR_TEXT_REGION 18 796 44 796 50 HELIX 50 796 59 COLOUR_TEXT_REGION 50 796 59 796 50 HELIX 76 796 88 COLOUR_TEXT_REGION 76 796 88 796 50 HELIX 95 796 110 COLOUR_TEXT_REGION 95 796 110 796 50 HELIX 114 796 120 COLOUR_TEXT_REGION 114 796 120 796 50 STRAND 129 797 133 COLOUR_TEXT_REGION 129 797 133 797 51 STRAND 148 797 154 COLOUR_TEXT_REGION 148 797 154 797 51 STRAND 157 797 161 COLOUR_TEXT_REGION 157 797 161 797 51 STRAND 163 797 168 COLOUR_TEXT_REGION 163 797 168 797 51 STRAND 174 797 181 COLOUR_TEXT_REGION 174 797 181 797 51 STRAND 187 797 192 COLOUR_TEXT_REGION 187 797 192 797 51 STRAND 198 797 202 COLOUR_TEXT_REGION 198 797 202 797 51 STRAND 216 797 220 COLOUR_TEXT_REGION 216 797 220 797 51 STRAND 222 797 224 COLOUR_TEXT_REGION 222 797 224 797 51 HELIX 18 797 34 COLOUR_TEXT_REGION 18 797 34 797 50 HELIX 36 797 44 COLOUR_TEXT_REGION 36 797 44 797 50 HELIX 50 797 59 COLOUR_TEXT_REGION 50 797 59 797 50 HELIX 76 797 89 COLOUR_TEXT_REGION 76 797 89 797 50 HELIX 95 797 111 COLOUR_TEXT_REGION 95 797 111 797 50 HELIX 114 797 124 COLOUR_TEXT_REGION 114 797 124 797 50