SILENT_MODE BLOCK_FILE jp_f4SzIdA.concise.blc MAX_NSEQ 941 MAX_INPUT_LEN 943 OUTPUT_FILE jp_f4SzIdA.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 200 930 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 931 200 940 H SPACE SUB_CHARS 1 931 200 940 E SPACE SUB_CHARS 1 931 200 940 - SPACE STRAND 12 934 12 COLOUR_TEXT_REGION 12 934 12 934 51 STRAND 47 934 56 COLOUR_TEXT_REGION 47 934 56 934 51 STRAND 66 934 72 COLOUR_TEXT_REGION 66 934 72 934 51 STRAND 92 934 97 COLOUR_TEXT_REGION 92 934 97 934 51 STRAND 103 934 110 COLOUR_TEXT_REGION 103 934 110 934 51 STRAND 126 934 132 COLOUR_TEXT_REGION 126 934 132 934 51 STRAND 138 934 145 COLOUR_TEXT_REGION 138 934 145 934 51 STRAND 181 934 190 COLOUR_TEXT_REGION 181 934 190 934 51 STRAND 195 934 198 COLOUR_TEXT_REGION 195 934 198 934 51 STRAND 11 939 12 COLOUR_TEXT_REGION 11 939 12 939 51 STRAND 16 939 17 COLOUR_TEXT_REGION 16 939 17 939 51 STRAND 47 939 56 COLOUR_TEXT_REGION 47 939 56 939 51 STRAND 67 939 72 COLOUR_TEXT_REGION 67 939 72 939 51 STRAND 92 939 97 COLOUR_TEXT_REGION 92 939 97 939 51 STRAND 103 939 110 COLOUR_TEXT_REGION 103 939 110 939 51 STRAND 125 939 132 COLOUR_TEXT_REGION 125 939 132 939 51 STRAND 138 939 145 COLOUR_TEXT_REGION 138 939 145 939 51 STRAND 181 939 189 COLOUR_TEXT_REGION 181 939 189 939 51 STRAND 195 939 198 COLOUR_TEXT_REGION 195 939 198 939 51 STRAND 12 940 12 COLOUR_TEXT_REGION 12 940 12 940 51 STRAND 47 940 57 COLOUR_TEXT_REGION 47 940 57 940 51 STRAND 62 940 72 COLOUR_TEXT_REGION 62 940 72 940 51 STRAND 91 940 96 COLOUR_TEXT_REGION 91 940 96 940 51 STRAND 103 940 110 COLOUR_TEXT_REGION 103 940 110 940 51 STRAND 128 940 131 COLOUR_TEXT_REGION 128 940 131 940 51 STRAND 137 940 145 COLOUR_TEXT_REGION 137 940 145 940 51 STRAND 182 940 190 COLOUR_TEXT_REGION 182 940 190 940 51 STRAND 195 940 198 COLOUR_TEXT_REGION 195 940 198 940 51