SILENT_MODE BLOCK_FILE jp_jMM8QN6.concise.blc MAX_NSEQ 1067 MAX_INPUT_LEN 1069 OUTPUT_FILE jp_jMM8QN6.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 440 1056 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1057 440 1066 H SPACE SUB_CHARS 1 1057 440 1066 E SPACE SUB_CHARS 1 1057 440 1066 - SPACE STRAND 36 1060 41 COLOUR_TEXT_REGION 36 1060 41 1060 51 STRAND 105 1060 106 COLOUR_TEXT_REGION 105 1060 106 1060 51 STRAND 111 1060 114 COLOUR_TEXT_REGION 111 1060 114 1060 51 STRAND 135 1060 142 COLOUR_TEXT_REGION 135 1060 142 1060 51 STRAND 151 1060 154 COLOUR_TEXT_REGION 151 1060 154 1060 51 STRAND 194 1060 195 COLOUR_TEXT_REGION 194 1060 195 1060 51 STRAND 247 1060 250 COLOUR_TEXT_REGION 247 1060 250 1060 51 STRAND 258 1060 261 COLOUR_TEXT_REGION 258 1060 261 1060 51 STRAND 309 1060 314 COLOUR_TEXT_REGION 309 1060 314 1060 51 STRAND 355 1060 360 COLOUR_TEXT_REGION 355 1060 360 1060 51 STRAND 366 1060 368 COLOUR_TEXT_REGION 366 1060 368 1060 51 STRAND 409 1060 413 COLOUR_TEXT_REGION 409 1060 413 1060 51 STRAND 424 1060 424 COLOUR_TEXT_REGION 424 1060 424 1060 51 HELIX 12 1060 27 COLOUR_TEXT_REGION 12 1060 27 1060 50 HELIX 47 1060 58 COLOUR_TEXT_REGION 47 1060 58 1060 50 HELIX 96 1060 103 COLOUR_TEXT_REGION 96 1060 103 1060 50 HELIX 121 1060 131 COLOUR_TEXT_REGION 121 1060 131 1060 50 HELIX 180 1060 186 COLOUR_TEXT_REGION 180 1060 186 1060 50 HELIX 215 1060 224 COLOUR_TEXT_REGION 215 1060 224 1060 50 HELIX 232 1060 238 COLOUR_TEXT_REGION 232 1060 238 1060 50 HELIX 291 1060 302 COLOUR_TEXT_REGION 291 1060 302 1060 50 HELIX 327 1060 349 COLOUR_TEXT_REGION 327 1060 349 1060 50 HELIX 429 1060 438 COLOUR_TEXT_REGION 429 1060 438 1060 50 STRAND 36 1065 41 COLOUR_TEXT_REGION 36 1065 41 1065 51 STRAND 79 1065 79 COLOUR_TEXT_REGION 79 1065 79 1065 51 STRAND 105 1065 107 COLOUR_TEXT_REGION 105 1065 107 1065 51 STRAND 111 1065 114 COLOUR_TEXT_REGION 111 1065 114 1065 51 STRAND 135 1065 142 COLOUR_TEXT_REGION 135 1065 142 1065 51 STRAND 151 1065 154 COLOUR_TEXT_REGION 151 1065 154 1065 51 STRAND 194 1065 196 COLOUR_TEXT_REGION 194 1065 196 1065 51 STRAND 229 1065 230 COLOUR_TEXT_REGION 229 1065 230 1065 51 STRAND 246 1065 251 COLOUR_TEXT_REGION 246 1065 251 1065 51 STRAND 258 1065 261 COLOUR_TEXT_REGION 258 1065 261 1065 51 STRAND 309 1065 314 COLOUR_TEXT_REGION 309 1065 314 1065 51 STRAND 355 1065 360 COLOUR_TEXT_REGION 355 1065 360 1065 51 STRAND 366 1065 368 COLOUR_TEXT_REGION 366 1065 368 1065 51 STRAND 409 1065 413 COLOUR_TEXT_REGION 409 1065 413 1065 51 STRAND 423 1065 425 COLOUR_TEXT_REGION 423 1065 425 1065 51 HELIX 12 1065 26 COLOUR_TEXT_REGION 12 1065 26 1065 50 HELIX 47 1065 58 COLOUR_TEXT_REGION 47 1065 58 1065 50 HELIX 95 1065 103 COLOUR_TEXT_REGION 95 1065 103 1065 50 HELIX 121 1065 131 COLOUR_TEXT_REGION 121 1065 131 1065 50 HELIX 182 1065 185 COLOUR_TEXT_REGION 182 1065 185 1065 50 HELIX 217 1065 223 COLOUR_TEXT_REGION 217 1065 223 1065 50 HELIX 232 1065 238 COLOUR_TEXT_REGION 232 1065 238 1065 50 HELIX 291 1065 302 COLOUR_TEXT_REGION 291 1065 302 1065 50 HELIX 327 1065 349 COLOUR_TEXT_REGION 327 1065 349 1065 50 HELIX 429 1065 438 COLOUR_TEXT_REGION 429 1065 438 1065 50 STRAND 36 1066 41 COLOUR_TEXT_REGION 36 1066 41 1066 51 STRAND 112 1066 114 COLOUR_TEXT_REGION 112 1066 114 1066 51 STRAND 135 1066 142 COLOUR_TEXT_REGION 135 1066 142 1066 51 STRAND 150 1066 154 COLOUR_TEXT_REGION 150 1066 154 1066 51 STRAND 310 1066 314 COLOUR_TEXT_REGION 310 1066 314 1066 51 STRAND 354 1066 359 COLOUR_TEXT_REGION 354 1066 359 1066 51 STRAND 410 1066 414 COLOUR_TEXT_REGION 410 1066 414 1066 51 HELIX 12 1066 28 COLOUR_TEXT_REGION 12 1066 28 1066 50 HELIX 47 1066 59 COLOUR_TEXT_REGION 47 1066 59 1066 50 HELIX 98 1066 103 COLOUR_TEXT_REGION 98 1066 103 1066 50 HELIX 123 1066 130 COLOUR_TEXT_REGION 123 1066 130 1066 50 HELIX 180 1066 188 COLOUR_TEXT_REGION 180 1066 188 1066 50 HELIX 215 1066 224 COLOUR_TEXT_REGION 215 1066 224 1066 50 HELIX 232 1066 238 COLOUR_TEXT_REGION 232 1066 238 1066 50 HELIX 257 1066 261 COLOUR_TEXT_REGION 257 1066 261 1066 50 HELIX 291 1066 302 COLOUR_TEXT_REGION 291 1066 302 1066 50 HELIX 327 1066 349 COLOUR_TEXT_REGION 327 1066 349 1066 50 HELIX 398 1066 398 COLOUR_TEXT_REGION 398 1066 398 1066 50 HELIX 429 1066 438 COLOUR_TEXT_REGION 429 1066 438 1066 50