SILENT_MODE BLOCK_FILE jp_NOwtuDQ.concise.blc MAX_NSEQ 1140 MAX_INPUT_LEN 1142 OUTPUT_FILE jp_NOwtuDQ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 68 1129 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1130 68 1139 H SPACE SUB_CHARS 1 1130 68 1139 E SPACE SUB_CHARS 1 1130 68 1139 - SPACE STRAND 13 1133 14 COLOUR_TEXT_REGION 13 1133 14 1133 51 STRAND 23 1133 30 COLOUR_TEXT_REGION 23 1133 30 1133 51 STRAND 39 1133 44 COLOUR_TEXT_REGION 39 1133 44 1133 51 STRAND 49 1133 51 COLOUR_TEXT_REGION 49 1133 51 1133 51 HELIX 56 1133 65 COLOUR_TEXT_REGION 56 1133 65 1133 50 STRAND 13 1138 14 COLOUR_TEXT_REGION 13 1138 14 1138 51 STRAND 24 1138 30 COLOUR_TEXT_REGION 24 1138 30 1138 51 STRAND 39 1138 44 COLOUR_TEXT_REGION 39 1138 44 1138 51 STRAND 49 1138 50 COLOUR_TEXT_REGION 49 1138 50 1138 51 HELIX 56 1138 65 COLOUR_TEXT_REGION 56 1138 65 1138 50 STRAND 13 1139 14 COLOUR_TEXT_REGION 13 1139 14 1139 51 STRAND 23 1139 25 COLOUR_TEXT_REGION 23 1139 25 1139 51 STRAND 27 1139 30 COLOUR_TEXT_REGION 27 1139 30 1139 51 STRAND 39 1139 44 COLOUR_TEXT_REGION 39 1139 44 1139 51 STRAND 48 1139 51 COLOUR_TEXT_REGION 48 1139 51 1139 51 HELIX 56 1139 65 COLOUR_TEXT_REGION 56 1139 65 1139 50