Last position-specific scoring matrix computed, weighted observed percentages rounded down, information per position, and relative weight of gapless real matches to pseudocounts A R N D C Q E G H I L K M F P S T W Y V A R N D C Q E G H I L K M F P S T W Y V 1 E -1 0 0 1 -4 2 5 -2 0 -4 -3 1 -2 -4 -1 0 -1 -3 -2 -3 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0.82 0.06 2 V 0 -3 -3 -3 -1 -2 -3 -3 -3 3 1 -3 1 -1 -3 -2 0 -3 -1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0.44 0.06 3 T 0 -1 0 -1 -1 -1 -1 -1 -2 -2 -2 -1 -1 -3 -1 3 4 -3 -2 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 61 0 0 0 0.49 0.09 4 C -1 -4 -3 -4 10 -4 -4 -3 -4 -2 -2 -4 -2 -3 -3 -1 -1 -3 -3 -1 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.75 0.20 5 E -1 -1 -1 0 -3 0 4 -2 -1 -2 -3 0 -2 -3 -2 0 4 -3 -2 -2 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 50 0 0 0 0.61 0.20 6 P -1 -3 -3 -2 -3 -2 -2 -3 -3 -3 -4 -2 -3 -4 8 -1 -2 -4 -4 -3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 2.28 0.20 7 G 0 -2 -1 -2 -3 -2 -2 6 -2 -4 -4 1 -3 -4 -3 -1 -2 -3 -4 -4 0 0 0 0 0 0 0 85 0 0 0 15 0 0 0 0 0 0 0 0 1.06 0.20 8 T 3 -2 -1 -2 -1 -1 -1 -1 -2 -2 -2 -1 -2 -3 -1 3 3 -3 -2 -1 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 34 0 0 0 0.47 0.20 9 T -1 -2 -1 -2 -2 -1 -1 -2 -1 -2 -2 -1 -1 -1 -2 2 5 -2 3 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 73 0 15 0 0.58 0.20 10 F -3 -3 -3 -4 -3 -3 -3 -4 0 -1 -1 -3 -1 6 -4 -3 -3 1 5 -2 0 0 0 0 0 0 0 0 0 0 0 0 0 65 0 0 0 0 35 0 1.03 0.20 11 K -1 2 -1 -1 -4 1 0 -2 -1 -3 -3 6 -2 -4 -2 -1 -1 -4 -2 -3 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0.84 0.20 12 D -2 -1 -1 3 -3 0 2 -3 -2 1 0 1 2 -2 -2 -1 1 -3 -2 -1 0 0 0 19 0 0 20 0 0 15 9 12 10 0 0 0 15 0 0 0 0.22 0.20 13 K -2 -1 0 4 -4 0 3 1 -1 -4 -4 2 -3 -4 -2 -1 -2 -4 -3 -3 0 0 0 41 0 0 30 10 0 0 0 19 0 0 0 0 0 0 0 0 0.63 0.20 14 C -1 -4 -3 -4 10 -4 -4 -3 -4 -2 -2 -4 -2 -3 -3 -1 -1 -3 -3 -1 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.75 0.20 15 N -2 -1 7 1 -3 -1 -1 -1 0 -4 -4 -1 -3 -4 -3 0 -1 -4 -3 -4 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.10 0.20 16 T -1 -2 -1 -2 -2 -1 -2 -2 -2 2 -1 -1 -1 -2 -2 2 5 -3 -2 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 12 68 0 0 0 0.51 0.20 17 C -1 -4 -3 -4 10 -4 -4 -3 -4 -2 -2 -4 -2 -3 -3 -1 -1 -3 -3 -1 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.75 0.20 18 R -2 6 -2 -3 -3 0 -1 -3 -1 -1 1 1 -1 -2 -3 -2 -2 -3 -2 1 0 70 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 15 0.61 0.20 19 C -1 -4 -3 -4 10 -4 -4 -3 -4 -2 -2 -4 -2 -3 -3 -1 -1 -3 -3 -1 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.75 0.20 20 G 1 2 -1 -2 -2 -1 -1 3 -2 -3 -3 0 -2 -3 -2 3 0 -3 -3 -2 15 20 0 0 0 0 0 28 0 0 0 0 0 0 0 37 0 0 0 0 0.45 0.20 21 S 2 -1 0 2 -2 0 2 -1 -2 -3 -3 2 -2 -3 -2 3 0 -4 -3 -2 20 0 0 15 0 0 12 0 0 0 0 15 0 0 0 39 0 0 0 0 0.38 0.20 22 D -2 -2 1 7 -4 -1 1 -2 -2 -4 -4 -1 -4 -4 -2 -1 -2 -5 -4 -4 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.27 0.20 23 G 0 -3 -1 -2 -3 -2 -3 6 -3 -4 -4 -2 -3 -4 -3 -1 -2 -3 -4 -4 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1.34 0.20 24 K -1 1 -1 -1 -3 1 2 -2 -1 -3 -2 5 2 -3 -2 1 -1 -3 -2 -2 0 0 0 0 0 0 15 0 0 0 0 60 10 0 0 15 0 0 0 0 0.48 0.20 25 S 2 -2 -1 -2 -1 -1 -1 -1 -2 -1 -2 -1 -1 -3 -2 4 2 -3 -2 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 12 0 0 20 0.38 0.20 26 A 2 -2 -2 -2 -2 -2 -2 2 -2 -1 -1 -2 2 2 -2 1 -1 -2 -1 0 31 0 0 0 0 0 0 20 0 0 0 0 9 15 0 15 0 0 0 10 0.25 0.20 27 V 2 -2 -2 -3 -1 -2 -2 -2 -3 2 -1 -2 -1 -2 -2 2 0 -3 -2 3 29 0 0 0 0 0 0 0 0 15 0 0 0 0 0 20 0 0 0 36 0.30 0.20 28 C -1 -4 -3 -4 10 -4 -4 -3 -4 -2 -2 -4 -2 -3 -3 -1 -1 -3 -3 -1 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.75 0.20 29 T -1 -2 -1 -2 -1 -1 -1 -2 -2 -1 -2 -1 -1 -3 -2 1 6 -3 -2 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0.80 0.20 30 K -2 4 -2 -2 -3 2 -1 -3 -1 -1 1 2 3 -2 -3 -1 -1 -3 -2 -1 0 30 0 0 0 15 0 0 0 0 21 20 15 0 0 0 0 0 0 0 0.37 0.20 31 L -1 1 -1 -2 -3 0 0 -2 -2 -2 0 5 3 -3 -2 -1 -1 -3 -2 -2 0 0 0 0 0 0 0 0 0 0 10 75 15 0 0 0 0 0 0 0 0.53 0.20 32 W 0 -2 -2 -3 -3 2 -2 1 -2 0 -1 -2 -1 4 -3 0 -2 5 0 -1 9 0 0 0 0 15 0 15 0 10 0 0 0 31 0 10 0 10 0 0 0.32 0.20 33 C -1 -4 -3 -4 10 -4 -4 -3 -4 -2 -2 -4 -2 -3 -3 -1 -1 -3 -3 -1 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.75 0.20 34 N -1 -2 2 -1 -3 -1 -1 -2 -2 -3 -3 -1 -3 -4 7 2 -1 -4 -3 -3 0 0 16 0 0 0 0 0 0 0 0 0 0 0 64 21 0 0 0 0 1.26 0.14 35 Q -1 0 0 0 -4 5 4 -2 0 -3 -3 1 -1 -4 -1 0 -1 -3 -2 -3 0 0 0 0 0 61 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0.69 0.07 K Lambda Standard Ungapped 0.1322 0.3196 Standard Gapped 0.0410 0.2670 PSI Ungapped 0.1464 0.3179 PSI Gapped 0.0448 0.2670