SILENT_MODE BLOCK_FILE jp_czkgg7Y.concise.blc MAX_NSEQ 446 MAX_INPUT_LEN 448 OUTPUT_FILE jp_czkgg7Y.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 131 435 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 436 131 445 H SPACE SUB_CHARS 1 436 131 445 E SPACE SUB_CHARS 1 436 131 445 - SPACE STRAND 16 439 16 COLOUR_TEXT_REGION 16 439 16 439 51 STRAND 35 439 43 COLOUR_TEXT_REGION 35 439 43 439 51 STRAND 49 439 58 COLOUR_TEXT_REGION 49 439 58 439 51 STRAND 64 439 65 COLOUR_TEXT_REGION 64 439 65 439 51 STRAND 71 439 79 COLOUR_TEXT_REGION 71 439 79 439 51 STRAND 85 439 91 COLOUR_TEXT_REGION 85 439 91 439 51 HELIX 9 439 15 COLOUR_TEXT_REGION 9 439 15 439 50 HELIX 19 439 27 COLOUR_TEXT_REGION 19 439 27 439 50 HELIX 98 439 110 COLOUR_TEXT_REGION 98 439 110 439 50 HELIX 118 439 129 COLOUR_TEXT_REGION 118 439 129 439 50 STRAND 16 444 16 COLOUR_TEXT_REGION 16 444 16 444 51 STRAND 35 444 43 COLOUR_TEXT_REGION 35 444 43 444 51 STRAND 49 444 58 COLOUR_TEXT_REGION 49 444 58 444 51 STRAND 64 444 65 COLOUR_TEXT_REGION 64 444 65 444 51 STRAND 71 444 79 COLOUR_TEXT_REGION 71 444 79 444 51 STRAND 86 444 92 COLOUR_TEXT_REGION 86 444 92 444 51 HELIX 9 444 15 COLOUR_TEXT_REGION 9 444 15 444 50 HELIX 19 444 27 COLOUR_TEXT_REGION 19 444 27 444 50 HELIX 98 444 110 COLOUR_TEXT_REGION 98 444 110 444 50 HELIX 118 444 129 COLOUR_TEXT_REGION 118 444 129 444 50 STRAND 15 445 16 COLOUR_TEXT_REGION 15 445 16 445 51 STRAND 34 445 43 COLOUR_TEXT_REGION 34 445 43 445 51 STRAND 49 445 56 COLOUR_TEXT_REGION 49 445 56 445 51 STRAND 58 445 58 COLOUR_TEXT_REGION 58 445 58 445 51 STRAND 64 445 65 COLOUR_TEXT_REGION 64 445 65 445 51 STRAND 71 445 79 COLOUR_TEXT_REGION 71 445 79 445 51 STRAND 85 445 90 COLOUR_TEXT_REGION 85 445 90 445 51 HELIX 9 445 14 COLOUR_TEXT_REGION 9 445 14 445 50 HELIX 19 445 26 COLOUR_TEXT_REGION 19 445 26 445 50 HELIX 98 445 110 COLOUR_TEXT_REGION 98 445 110 445 50 HELIX 118 445 129 COLOUR_TEXT_REGION 118 445 129 445 50