SILENT_MODE BLOCK_FILE jp_KhCwd7S.concise.blc MAX_NSEQ 876 MAX_INPUT_LEN 878 OUTPUT_FILE jp_KhCwd7S.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 233 865 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 866 233 875 H SPACE SUB_CHARS 1 866 233 875 E SPACE SUB_CHARS 1 866 233 875 - SPACE STRAND 14 869 17 COLOUR_TEXT_REGION 14 869 17 869 51 STRAND 36 869 41 COLOUR_TEXT_REGION 36 869 41 869 51 STRAND 45 869 50 COLOUR_TEXT_REGION 45 869 50 869 51 STRAND 55 869 60 COLOUR_TEXT_REGION 55 869 60 869 51 STRAND 83 869 89 COLOUR_TEXT_REGION 83 869 89 869 51 STRAND 101 869 104 COLOUR_TEXT_REGION 101 869 104 869 51 STRAND 108 869 110 COLOUR_TEXT_REGION 108 869 110 869 51 STRAND 147 869 154 COLOUR_TEXT_REGION 147 869 154 869 51 STRAND 195 869 202 COLOUR_TEXT_REGION 195 869 202 869 51 HELIX 21 869 31 COLOUR_TEXT_REGION 21 869 31 869 50 HELIX 66 869 78 COLOUR_TEXT_REGION 66 869 78 869 50 HELIX 130 869 142 COLOUR_TEXT_REGION 130 869 142 869 50 HELIX 163 869 171 COLOUR_TEXT_REGION 163 869 171 869 50 HELIX 176 869 190 COLOUR_TEXT_REGION 176 869 190 869 50 HELIX 216 869 231 COLOUR_TEXT_REGION 216 869 231 869 50 STRAND 14 874 17 COLOUR_TEXT_REGION 14 874 17 874 51 STRAND 36 874 41 COLOUR_TEXT_REGION 36 874 41 874 51 STRAND 44 874 51 COLOUR_TEXT_REGION 44 874 51 874 51 STRAND 55 874 60 COLOUR_TEXT_REGION 55 874 60 874 51 STRAND 83 874 89 COLOUR_TEXT_REGION 83 874 89 874 51 STRAND 102 874 104 COLOUR_TEXT_REGION 102 874 104 874 51 STRAND 107 874 110 COLOUR_TEXT_REGION 107 874 110 874 51 STRAND 147 874 154 COLOUR_TEXT_REGION 147 874 154 874 51 STRAND 177 874 178 COLOUR_TEXT_REGION 177 874 178 874 51 STRAND 195 874 202 COLOUR_TEXT_REGION 195 874 202 874 51 HELIX 21 874 31 COLOUR_TEXT_REGION 21 874 31 874 50 HELIX 65 874 78 COLOUR_TEXT_REGION 65 874 78 874 50 HELIX 130 874 142 COLOUR_TEXT_REGION 130 874 142 874 50 HELIX 163 874 170 COLOUR_TEXT_REGION 163 874 170 874 50 HELIX 181 874 190 COLOUR_TEXT_REGION 181 874 190 874 50 HELIX 216 874 231 COLOUR_TEXT_REGION 216 874 231 874 50 STRAND 14 875 17 COLOUR_TEXT_REGION 14 875 17 875 51 STRAND 36 875 40 COLOUR_TEXT_REGION 36 875 40 875 51 STRAND 45 875 50 COLOUR_TEXT_REGION 45 875 50 875 51 STRAND 55 875 60 COLOUR_TEXT_REGION 55 875 60 875 51 STRAND 83 875 90 COLOUR_TEXT_REGION 83 875 90 875 51 STRAND 101 875 104 COLOUR_TEXT_REGION 101 875 104 875 51 STRAND 146 875 154 COLOUR_TEXT_REGION 146 875 154 875 51 STRAND 195 875 201 COLOUR_TEXT_REGION 195 875 201 875 51 HELIX 21 875 31 COLOUR_TEXT_REGION 21 875 31 875 50 HELIX 67 875 78 COLOUR_TEXT_REGION 67 875 78 875 50 HELIX 130 875 141 COLOUR_TEXT_REGION 130 875 141 875 50 HELIX 163 875 171 COLOUR_TEXT_REGION 163 875 171 875 50 HELIX 175 875 191 COLOUR_TEXT_REGION 175 875 191 875 50 HELIX 215 875 231 COLOUR_TEXT_REGION 215 875 231 875 50