SILENT_MODE
BLOCK_FILE jp_1ACBfcp.concise.blc
MAX_NSEQ 472
MAX_INPUT_LEN 474
OUTPUT_FILE jp_1ACBfcp.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 65 461   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 462 65 471 H SPACE
SUB_CHARS 1 462 65 471 E SPACE
SUB_CHARS 1 462 65 471 - SPACE
STRAND 11 465 16
COLOUR_TEXT_REGION 11 465 16 465 51
STRAND 22 465 25
COLOUR_TEXT_REGION 22 465 25 465 51
STRAND 38 465 42
COLOUR_TEXT_REGION 38 465 42 465 51
STRAND 45 465 47
COLOUR_TEXT_REGION 45 465 47 465 51
HELIX 49 465 52
COLOUR_TEXT_REGION 49 465 52 465 50
STRAND 11 470 16
COLOUR_TEXT_REGION 11 470 16 470 51
STRAND 22 470 25
COLOUR_TEXT_REGION 22 470 25 470 51
STRAND 38 470 42
COLOUR_TEXT_REGION 38 470 42 470 51
STRAND 45 470 47
COLOUR_TEXT_REGION 45 470 47 470 51
HELIX 49 470 54
COLOUR_TEXT_REGION 49 470 54 470 50
STRAND 11 471 16
COLOUR_TEXT_REGION 11 471 16 471 51
STRAND 22 471 22
COLOUR_TEXT_REGION 22 471 22 471 51
STRAND 39 471 43
COLOUR_TEXT_REGION 39 471 43 471 51
STRAND 45 471 48
COLOUR_TEXT_REGION 45 471 48 471 51
HELIX 28 471 33
COLOUR_TEXT_REGION 28 471 33 471 50
HELIX 49 471 51
COLOUR_TEXT_REGION 49 471 51 471 50