SILENT_MODE BLOCK_FILE jp_g4hGrLm.concise.blc MAX_NSEQ 809 MAX_INPUT_LEN 811 OUTPUT_FILE jp_g4hGrLm.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 197 798 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 799 197 808 H SPACE SUB_CHARS 1 799 197 808 E SPACE SUB_CHARS 1 799 197 808 - SPACE STRAND 80 802 85 COLOUR_TEXT_REGION 80 802 85 802 51 STRAND 102 802 106 COLOUR_TEXT_REGION 102 802 106 802 51 STRAND 136 802 141 COLOUR_TEXT_REGION 136 802 141 802 51 STRAND 165 802 169 COLOUR_TEXT_REGION 165 802 169 802 51 HELIX 4 802 15 COLOUR_TEXT_REGION 4 802 15 802 50 HELIX 21 802 32 COLOUR_TEXT_REGION 21 802 32 802 50 HELIX 36 802 52 COLOUR_TEXT_REGION 36 802 52 802 50 HELIX 88 802 96 COLOUR_TEXT_REGION 88 802 96 802 50 HELIX 123 802 131 COLOUR_TEXT_REGION 123 802 131 802 50 HELIX 148 802 159 COLOUR_TEXT_REGION 148 802 159 802 50 HELIX 179 802 192 COLOUR_TEXT_REGION 179 802 192 802 50 STRAND 80 807 85 COLOUR_TEXT_REGION 80 807 85 807 51 STRAND 102 807 106 COLOUR_TEXT_REGION 102 807 106 807 51 STRAND 136 807 141 COLOUR_TEXT_REGION 136 807 141 807 51 STRAND 166 807 169 COLOUR_TEXT_REGION 166 807 169 807 51 HELIX 4 807 15 COLOUR_TEXT_REGION 4 807 15 807 50 HELIX 21 807 33 COLOUR_TEXT_REGION 21 807 33 807 50 HELIX 36 807 51 COLOUR_TEXT_REGION 36 807 51 807 50 HELIX 88 807 96 COLOUR_TEXT_REGION 88 807 96 807 50 HELIX 123 807 131 COLOUR_TEXT_REGION 123 807 131 807 50 HELIX 148 807 159 COLOUR_TEXT_REGION 148 807 159 807 50 HELIX 179 807 192 COLOUR_TEXT_REGION 179 807 192 807 50 STRAND 56 808 59 COLOUR_TEXT_REGION 56 808 59 808 51 STRAND 80 808 85 COLOUR_TEXT_REGION 80 808 85 808 51 STRAND 103 808 106 COLOUR_TEXT_REGION 103 808 106 808 51 STRAND 136 808 141 COLOUR_TEXT_REGION 136 808 141 808 51 STRAND 165 808 169 COLOUR_TEXT_REGION 165 808 169 808 51 HELIX 4 808 14 COLOUR_TEXT_REGION 4 808 14 808 50 HELIX 21 808 32 COLOUR_TEXT_REGION 21 808 32 808 50 HELIX 36 808 52 COLOUR_TEXT_REGION 36 808 52 808 50 HELIX 87 808 97 COLOUR_TEXT_REGION 87 808 97 808 50 HELIX 123 808 130 COLOUR_TEXT_REGION 123 808 130 808 50 HELIX 148 808 159 COLOUR_TEXT_REGION 148 808 159 808 50 HELIX 180 808 192 COLOUR_TEXT_REGION 180 808 192 808 50