SILENT_MODE BLOCK_FILE jp_WawvSvz.concise.blc MAX_NSEQ 913 MAX_INPUT_LEN 915 OUTPUT_FILE jp_WawvSvz.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 147 902 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 903 147 912 H SPACE SUB_CHARS 1 903 147 912 E SPACE SUB_CHARS 1 903 147 912 - SPACE STRAND 3 906 6 COLOUR_TEXT_REGION 3 906 6 906 51 STRAND 21 906 25 COLOUR_TEXT_REGION 21 906 25 906 51 STRAND 49 906 56 COLOUR_TEXT_REGION 49 906 56 906 51 STRAND 79 906 84 COLOUR_TEXT_REGION 79 906 84 906 51 STRAND 116 906 120 COLOUR_TEXT_REGION 116 906 120 906 51 STRAND 144 906 146 COLOUR_TEXT_REGION 144 906 146 906 51 HELIX 30 906 42 COLOUR_TEXT_REGION 30 906 42 906 50 HELIX 62 906 73 COLOUR_TEXT_REGION 62 906 73 906 50 HELIX 101 906 107 COLOUR_TEXT_REGION 101 906 107 906 50 HELIX 123 906 136 COLOUR_TEXT_REGION 123 906 136 906 50 STRAND 2 911 6 COLOUR_TEXT_REGION 2 911 6 911 51 STRAND 21 911 25 COLOUR_TEXT_REGION 21 911 25 911 51 STRAND 49 911 55 COLOUR_TEXT_REGION 49 911 55 911 51 STRAND 79 911 85 COLOUR_TEXT_REGION 79 911 85 911 51 STRAND 116 911 120 COLOUR_TEXT_REGION 116 911 120 911 51 STRAND 144 911 146 COLOUR_TEXT_REGION 144 911 146 911 51 HELIX 30 911 42 COLOUR_TEXT_REGION 30 911 42 911 50 HELIX 59 911 74 COLOUR_TEXT_REGION 59 911 74 911 50 HELIX 101 911 107 COLOUR_TEXT_REGION 101 911 107 911 50 HELIX 123 911 136 COLOUR_TEXT_REGION 123 911 136 911 50 STRAND 3 912 6 COLOUR_TEXT_REGION 3 912 6 912 51 STRAND 21 912 25 COLOUR_TEXT_REGION 21 912 25 912 51 STRAND 49 912 56 COLOUR_TEXT_REGION 49 912 56 912 51 STRAND 79 912 83 COLOUR_TEXT_REGION 79 912 83 912 51 STRAND 116 912 120 COLOUR_TEXT_REGION 116 912 120 912 51 STRAND 144 912 146 COLOUR_TEXT_REGION 144 912 146 912 51 HELIX 29 912 42 COLOUR_TEXT_REGION 29 912 42 912 50 HELIX 66 912 73 COLOUR_TEXT_REGION 66 912 73 912 50 HELIX 101 912 107 COLOUR_TEXT_REGION 101 912 107 912 50 HELIX 123 912 136 COLOUR_TEXT_REGION 123 912 136 912 50