SILENT_MODE BLOCK_FILE jp_3J5H4D8.concise.blc MAX_NSEQ 858 MAX_INPUT_LEN 860 OUTPUT_FILE jp_3J5H4D8.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 194 847 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 848 194 857 H SPACE SUB_CHARS 1 848 194 857 E SPACE SUB_CHARS 1 848 194 857 - SPACE STRAND 3 851 8 COLOUR_TEXT_REGION 3 851 8 851 51 STRAND 33 851 36 COLOUR_TEXT_REGION 33 851 36 851 51 STRAND 71 851 75 COLOUR_TEXT_REGION 71 851 75 851 51 STRAND 106 851 112 COLOUR_TEXT_REGION 106 851 112 851 51 STRAND 137 851 137 COLOUR_TEXT_REGION 137 851 137 851 51 HELIX 13 851 27 COLOUR_TEXT_REGION 13 851 27 851 50 HELIX 46 851 47 COLOUR_TEXT_REGION 46 851 47 851 50 HELIX 62 851 66 COLOUR_TEXT_REGION 62 851 66 851 50 HELIX 85 851 93 COLOUR_TEXT_REGION 85 851 93 851 50 HELIX 95 851 98 COLOUR_TEXT_REGION 95 851 98 851 50 HELIX 119 851 136 COLOUR_TEXT_REGION 119 851 136 851 50 HELIX 172 851 192 COLOUR_TEXT_REGION 172 851 192 851 50 STRAND 3 856 8 COLOUR_TEXT_REGION 3 856 8 856 51 STRAND 31 856 36 COLOUR_TEXT_REGION 31 856 36 856 51 STRAND 71 856 75 COLOUR_TEXT_REGION 71 856 75 856 51 STRAND 106 856 112 COLOUR_TEXT_REGION 106 856 112 856 51 STRAND 136 856 138 COLOUR_TEXT_REGION 136 856 138 856 51 HELIX 13 856 27 COLOUR_TEXT_REGION 13 856 27 856 50 HELIX 62 856 67 COLOUR_TEXT_REGION 62 856 67 856 50 HELIX 84 856 98 COLOUR_TEXT_REGION 84 856 98 856 50 HELIX 119 856 133 COLOUR_TEXT_REGION 119 856 133 856 50 HELIX 172 856 192 COLOUR_TEXT_REGION 172 856 192 856 50 STRAND 3 857 8 COLOUR_TEXT_REGION 3 857 8 857 51 STRAND 71 857 76 COLOUR_TEXT_REGION 71 857 76 857 51 STRAND 104 857 113 COLOUR_TEXT_REGION 104 857 113 857 51 HELIX 13 857 28 COLOUR_TEXT_REGION 13 857 28 857 50 HELIX 44 857 48 COLOUR_TEXT_REGION 44 857 48 857 50 HELIX 62 857 65 COLOUR_TEXT_REGION 62 857 65 857 50 HELIX 88 857 92 COLOUR_TEXT_REGION 88 857 92 857 50 HELIX 124 857 137 COLOUR_TEXT_REGION 124 857 137 857 50 HELIX 172 857 192 COLOUR_TEXT_REGION 172 857 192 857 50