SILENT_MODE BLOCK_FILE jp_KvxJxgu.concise.blc MAX_NSEQ 476 MAX_INPUT_LEN 478 OUTPUT_FILE jp_KvxJxgu.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 153 465 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 466 153 475 H SPACE SUB_CHARS 1 466 153 475 E SPACE SUB_CHARS 1 466 153 475 - SPACE STRAND 6 469 12 COLOUR_TEXT_REGION 6 469 12 469 51 STRAND 21 469 30 COLOUR_TEXT_REGION 21 469 30 469 51 STRAND 41 469 47 COLOUR_TEXT_REGION 41 469 47 469 51 STRAND 56 469 64 COLOUR_TEXT_REGION 56 469 64 469 51 STRAND 70 469 75 COLOUR_TEXT_REGION 70 469 75 469 51 STRAND 85 469 90 COLOUR_TEXT_REGION 85 469 90 469 51 STRAND 96 469 98 COLOUR_TEXT_REGION 96 469 98 469 51 STRAND 104 469 111 COLOUR_TEXT_REGION 104 469 111 469 51 STRAND 140 469 143 COLOUR_TEXT_REGION 140 469 143 469 51 STRAND 147 469 150 COLOUR_TEXT_REGION 147 469 150 469 51 STRAND 5 474 12 COLOUR_TEXT_REGION 5 474 12 474 51 STRAND 21 474 30 COLOUR_TEXT_REGION 21 474 30 474 51 STRAND 41 474 47 COLOUR_TEXT_REGION 41 474 47 474 51 STRAND 57 474 65 COLOUR_TEXT_REGION 57 474 65 474 51 STRAND 71 474 74 COLOUR_TEXT_REGION 71 474 74 474 51 STRAND 85 474 90 COLOUR_TEXT_REGION 85 474 90 474 51 STRAND 97 474 97 COLOUR_TEXT_REGION 97 474 97 474 51 STRAND 104 474 111 COLOUR_TEXT_REGION 104 474 111 474 51 STRAND 140 474 143 COLOUR_TEXT_REGION 140 474 143 474 51 STRAND 147 474 150 COLOUR_TEXT_REGION 147 474 150 474 51 STRAND 6 475 12 COLOUR_TEXT_REGION 6 475 12 475 51 STRAND 21 475 30 COLOUR_TEXT_REGION 21 475 30 475 51 STRAND 41 475 47 COLOUR_TEXT_REGION 41 475 47 475 51 STRAND 56 475 64 COLOUR_TEXT_REGION 56 475 64 475 51 STRAND 69 475 75 COLOUR_TEXT_REGION 69 475 75 475 51 STRAND 85 475 90 COLOUR_TEXT_REGION 85 475 90 475 51 STRAND 95 475 98 COLOUR_TEXT_REGION 95 475 98 475 51 STRAND 104 475 111 COLOUR_TEXT_REGION 104 475 111 475 51 STRAND 139 475 143 COLOUR_TEXT_REGION 139 475 143 475 51 STRAND 146 475 150 COLOUR_TEXT_REGION 146 475 150 475 51