SILENT_MODE BLOCK_FILE jp_ZuqXyOA.concise.blc MAX_NSEQ 959 MAX_INPUT_LEN 961 OUTPUT_FILE jp_ZuqXyOA.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 116 948 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 949 116 958 H SPACE SUB_CHARS 1 949 116 958 E SPACE SUB_CHARS 1 949 116 958 - SPACE STRAND 8 952 13 COLOUR_TEXT_REGION 8 952 13 952 51 STRAND 18 952 23 COLOUR_TEXT_REGION 18 952 23 952 51 STRAND 27 952 35 COLOUR_TEXT_REGION 27 952 35 952 51 STRAND 45 952 50 COLOUR_TEXT_REGION 45 952 50 952 51 STRAND 63 952 65 COLOUR_TEXT_REGION 63 952 65 952 51 STRAND 72 952 75 COLOUR_TEXT_REGION 72 952 75 952 51 STRAND 92 952 93 COLOUR_TEXT_REGION 92 952 93 952 51 STRAND 111 952 115 COLOUR_TEXT_REGION 111 952 115 952 51 HELIX 96 952 105 COLOUR_TEXT_REGION 96 952 105 952 50 STRAND 8 957 13 COLOUR_TEXT_REGION 8 957 13 957 51 STRAND 18 957 23 COLOUR_TEXT_REGION 18 957 23 957 51 STRAND 27 957 35 COLOUR_TEXT_REGION 27 957 35 957 51 STRAND 45 957 51 COLOUR_TEXT_REGION 45 957 51 957 51 STRAND 63 957 65 COLOUR_TEXT_REGION 63 957 65 957 51 STRAND 72 957 75 COLOUR_TEXT_REGION 72 957 75 957 51 STRAND 91 957 93 COLOUR_TEXT_REGION 91 957 93 957 51 STRAND 111 957 115 COLOUR_TEXT_REGION 111 957 115 957 51 HELIX 96 957 105 COLOUR_TEXT_REGION 96 957 105 957 50 STRAND 8 958 13 COLOUR_TEXT_REGION 8 958 13 958 51 STRAND 18 958 23 COLOUR_TEXT_REGION 18 958 23 958 51 STRAND 27 958 35 COLOUR_TEXT_REGION 27 958 35 958 51 STRAND 46 958 49 COLOUR_TEXT_REGION 46 958 49 958 51 STRAND 63 958 65 COLOUR_TEXT_REGION 63 958 65 958 51 STRAND 71 958 74 COLOUR_TEXT_REGION 71 958 74 958 51 STRAND 92 958 93 COLOUR_TEXT_REGION 92 958 93 958 51 STRAND 111 958 115 COLOUR_TEXT_REGION 111 958 115 958 51 HELIX 96 958 104 COLOUR_TEXT_REGION 96 958 104 958 50