SILENT_MODE BLOCK_FILE jp_e0xJRq6.concise.blc MAX_NSEQ 189 MAX_INPUT_LEN 191 OUTPUT_FILE jp_e0xJRq6.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 122 178 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 179 122 188 H SPACE SUB_CHARS 1 179 122 188 E SPACE SUB_CHARS 1 179 122 188 - SPACE STRAND 2 182 6 COLOUR_TEXT_REGION 2 182 6 182 51 STRAND 11 182 15 COLOUR_TEXT_REGION 11 182 15 182 51 STRAND 19 182 22 COLOUR_TEXT_REGION 19 182 22 182 51 STRAND 26 182 30 COLOUR_TEXT_REGION 26 182 30 182 51 STRAND 37 182 41 COLOUR_TEXT_REGION 37 182 41 182 51 STRAND 56 182 61 COLOUR_TEXT_REGION 56 182 61 182 51 STRAND 71 182 76 COLOUR_TEXT_REGION 71 182 76 182 51 STRAND 89 182 91 COLOUR_TEXT_REGION 89 182 91 182 51 STRAND 97 182 97 COLOUR_TEXT_REGION 97 182 97 182 51 HELIX 112 182 117 COLOUR_TEXT_REGION 112 182 117 182 50 STRAND 0 187 6 COLOUR_TEXT_REGION 0 187 6 187 51 STRAND 11 187 15 COLOUR_TEXT_REGION 11 187 15 187 51 STRAND 19 187 22 COLOUR_TEXT_REGION 19 187 22 187 51 STRAND 27 187 30 COLOUR_TEXT_REGION 27 187 30 187 51 STRAND 37 187 40 COLOUR_TEXT_REGION 37 187 40 187 51 STRAND 57 187 61 COLOUR_TEXT_REGION 57 187 61 187 51 STRAND 71 187 76 COLOUR_TEXT_REGION 71 187 76 187 51 STRAND 89 187 92 COLOUR_TEXT_REGION 89 187 92 187 51 STRAND 97 187 98 COLOUR_TEXT_REGION 97 187 98 187 51 HELIX 112 187 118 COLOUR_TEXT_REGION 112 187 118 187 50 STRAND 2 188 6 COLOUR_TEXT_REGION 2 188 6 188 51 STRAND 11 188 14 COLOUR_TEXT_REGION 11 188 14 188 51 STRAND 19 188 22 COLOUR_TEXT_REGION 19 188 22 188 51 STRAND 26 188 30 COLOUR_TEXT_REGION 26 188 30 188 51 STRAND 36 188 42 COLOUR_TEXT_REGION 36 188 42 188 51 STRAND 55 188 60 COLOUR_TEXT_REGION 55 188 60 188 51 STRAND 71 188 75 COLOUR_TEXT_REGION 71 188 75 188 51 HELIX 82 188 89 COLOUR_TEXT_REGION 82 188 89 188 50 HELIX 96 188 98 COLOUR_TEXT_REGION 96 188 98 188 50 HELIX 112 188 116 COLOUR_TEXT_REGION 112 188 116 188 50