SILENT_MODE BLOCK_FILE jp_kqAl0wF.concise.blc MAX_NSEQ 740 MAX_INPUT_LEN 742 OUTPUT_FILE jp_kqAl0wF.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 469 729 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 730 469 739 H SPACE SUB_CHARS 1 730 469 739 E SPACE SUB_CHARS 1 730 469 739 - SPACE STRAND 4 733 8 COLOUR_TEXT_REGION 4 733 8 733 51 STRAND 22 733 23 COLOUR_TEXT_REGION 22 733 23 733 51 STRAND 28 733 32 COLOUR_TEXT_REGION 28 733 32 733 51 STRAND 36 733 41 COLOUR_TEXT_REGION 36 733 41 733 51 STRAND 47 733 52 COLOUR_TEXT_REGION 47 733 52 733 51 STRAND 66 733 68 COLOUR_TEXT_REGION 66 733 68 733 51 STRAND 74 733 79 COLOUR_TEXT_REGION 74 733 79 733 51 STRAND 84 733 88 COLOUR_TEXT_REGION 84 733 88 733 51 STRAND 93 733 97 COLOUR_TEXT_REGION 93 733 97 733 51 STRAND 103 733 105 COLOUR_TEXT_REGION 103 733 105 733 51 STRAND 116 733 118 COLOUR_TEXT_REGION 116 733 118 733 51 STRAND 124 733 129 COLOUR_TEXT_REGION 124 733 129 733 51 STRAND 133 733 137 COLOUR_TEXT_REGION 133 733 137 733 51 STRAND 143 733 148 COLOUR_TEXT_REGION 143 733 148 733 51 STRAND 155 733 156 COLOUR_TEXT_REGION 155 733 156 733 51 STRAND 163 733 167 COLOUR_TEXT_REGION 163 733 167 733 51 STRAND 176 733 176 COLOUR_TEXT_REGION 176 733 176 733 51 STRAND 183 733 189 COLOUR_TEXT_REGION 183 733 189 733 51 STRAND 196 733 200 COLOUR_TEXT_REGION 196 733 200 733 51 STRAND 213 733 215 COLOUR_TEXT_REGION 213 733 215 733 51 STRAND 226 733 233 COLOUR_TEXT_REGION 226 733 233 733 51 STRAND 239 733 242 COLOUR_TEXT_REGION 239 733 242 733 51 STRAND 264 733 266 COLOUR_TEXT_REGION 264 733 266 733 51 STRAND 272 733 278 COLOUR_TEXT_REGION 272 733 278 733 51 STRAND 285 733 291 COLOUR_TEXT_REGION 285 733 291 733 51 STRAND 298 733 304 COLOUR_TEXT_REGION 298 733 304 733 51 STRAND 308 733 309 COLOUR_TEXT_REGION 308 733 309 733 51 STRAND 332 733 337 COLOUR_TEXT_REGION 332 733 337 733 51 STRAND 343 733 348 COLOUR_TEXT_REGION 343 733 348 733 51 STRAND 354 733 358 COLOUR_TEXT_REGION 354 733 358 733 51 STRAND 364 733 371 COLOUR_TEXT_REGION 364 733 371 733 51 STRAND 377 733 382 COLOUR_TEXT_REGION 377 733 382 733 51 STRAND 391 733 396 COLOUR_TEXT_REGION 391 733 396 733 51 STRAND 404 733 406 COLOUR_TEXT_REGION 404 733 406 733 51 STRAND 417 733 422 COLOUR_TEXT_REGION 417 733 422 733 51 STRAND 428 733 433 COLOUR_TEXT_REGION 428 733 433 733 51 STRAND 440 733 445 COLOUR_TEXT_REGION 440 733 445 733 51 STRAND 451 733 456 COLOUR_TEXT_REGION 451 733 456 733 51 HELIX 459 733 466 COLOUR_TEXT_REGION 459 733 466 733 50 STRAND 4 738 6 COLOUR_TEXT_REGION 4 738 6 738 51 STRAND 22 738 23 COLOUR_TEXT_REGION 22 738 23 738 51 STRAND 28 738 32 COLOUR_TEXT_REGION 28 738 32 738 51 STRAND 36 738 41 COLOUR_TEXT_REGION 36 738 41 738 51 STRAND 47 738 51 COLOUR_TEXT_REGION 47 738 51 738 51 STRAND 66 738 68 COLOUR_TEXT_REGION 66 738 68 738 51 STRAND 74 738 79 COLOUR_TEXT_REGION 74 738 79 738 51 STRAND 83 738 88 COLOUR_TEXT_REGION 83 738 88 738 51 STRAND 93 738 97 COLOUR_TEXT_REGION 93 738 97 738 51 STRAND 103 738 105 COLOUR_TEXT_REGION 103 738 105 738 51 STRAND 116 738 118 COLOUR_TEXT_REGION 116 738 118 738 51 STRAND 124 738 129 COLOUR_TEXT_REGION 124 738 129 738 51 STRAND 133 738 137 COLOUR_TEXT_REGION 133 738 137 738 51 STRAND 143 738 148 COLOUR_TEXT_REGION 143 738 148 738 51 STRAND 154 738 157 COLOUR_TEXT_REGION 154 738 157 738 51 STRAND 163 738 167 COLOUR_TEXT_REGION 163 738 167 738 51 STRAND 175 738 177 COLOUR_TEXT_REGION 175 738 177 738 51 STRAND 183 738 189 COLOUR_TEXT_REGION 183 738 189 738 51 STRAND 196 738 201 COLOUR_TEXT_REGION 196 738 201 738 51 STRAND 213 738 215 COLOUR_TEXT_REGION 213 738 215 738 51 STRAND 226 738 233 COLOUR_TEXT_REGION 226 738 233 738 51 STRAND 239 738 242 COLOUR_TEXT_REGION 239 738 242 738 51 STRAND 264 738 266 COLOUR_TEXT_REGION 264 738 266 738 51 STRAND 272 738 278 COLOUR_TEXT_REGION 272 738 278 738 51 STRAND 284 738 291 COLOUR_TEXT_REGION 284 738 291 738 51 STRAND 298 738 304 COLOUR_TEXT_REGION 298 738 304 738 51 STRAND 308 738 310 COLOUR_TEXT_REGION 308 738 310 738 51 STRAND 332 738 338 COLOUR_TEXT_REGION 332 738 338 738 51 STRAND 343 738 348 COLOUR_TEXT_REGION 343 738 348 738 51 STRAND 354 738 359 COLOUR_TEXT_REGION 354 738 359 738 51 STRAND 364 738 372 COLOUR_TEXT_REGION 364 738 372 738 51 STRAND 377 738 382 COLOUR_TEXT_REGION 377 738 382 738 51 STRAND 391 738 396 COLOUR_TEXT_REGION 391 738 396 738 51 STRAND 404 738 404 COLOUR_TEXT_REGION 404 738 404 738 51 STRAND 417 738 422 COLOUR_TEXT_REGION 417 738 422 738 51 STRAND 428 738 433 COLOUR_TEXT_REGION 428 738 433 738 51 STRAND 440 738 445 COLOUR_TEXT_REGION 440 738 445 738 51 STRAND 451 738 456 COLOUR_TEXT_REGION 451 738 456 738 51 HELIX 459 738 466 COLOUR_TEXT_REGION 459 738 466 738 50 STRAND 4 739 8 COLOUR_TEXT_REGION 4 739 8 739 51 STRAND 15 739 15 COLOUR_TEXT_REGION 15 739 15 739 51 STRAND 22 739 23 COLOUR_TEXT_REGION 22 739 23 739 51 STRAND 28 739 32 COLOUR_TEXT_REGION 28 739 32 739 51 STRAND 37 739 42 COLOUR_TEXT_REGION 37 739 42 739 51 STRAND 47 739 52 COLOUR_TEXT_REGION 47 739 52 739 51 STRAND 66 739 68 COLOUR_TEXT_REGION 66 739 68 739 51 STRAND 74 739 79 COLOUR_TEXT_REGION 74 739 79 739 51 STRAND 87 739 87 COLOUR_TEXT_REGION 87 739 87 739 51 STRAND 93 739 97 COLOUR_TEXT_REGION 93 739 97 739 51 STRAND 104 739 104 COLOUR_TEXT_REGION 104 739 104 739 51 STRAND 124 739 129 COLOUR_TEXT_REGION 124 739 129 739 51 STRAND 133 739 137 COLOUR_TEXT_REGION 133 739 137 739 51 STRAND 143 739 148 COLOUR_TEXT_REGION 143 739 148 739 51 STRAND 183 739 189 COLOUR_TEXT_REGION 183 739 189 739 51 STRAND 195 739 195 COLOUR_TEXT_REGION 195 739 195 739 51 STRAND 214 739 214 COLOUR_TEXT_REGION 214 739 214 739 51 STRAND 227 739 233 COLOUR_TEXT_REGION 227 739 233 739 51 STRAND 240 739 241 COLOUR_TEXT_REGION 240 739 241 739 51 STRAND 247 739 247 COLOUR_TEXT_REGION 247 739 247 739 51 STRAND 273 739 278 COLOUR_TEXT_REGION 273 739 278 739 51 STRAND 287 739 291 COLOUR_TEXT_REGION 287 739 291 739 51 STRAND 298 739 303 COLOUR_TEXT_REGION 298 739 303 739 51 STRAND 305 739 307 COLOUR_TEXT_REGION 305 739 307 739 51 STRAND 331 739 337 COLOUR_TEXT_REGION 331 739 337 739 51 STRAND 345 739 348 COLOUR_TEXT_REGION 345 739 348 739 51 STRAND 354 739 356 COLOUR_TEXT_REGION 354 739 356 739 51 STRAND 365 739 367 COLOUR_TEXT_REGION 365 739 367 739 51 STRAND 376 739 381 COLOUR_TEXT_REGION 376 739 381 739 51 STRAND 390 739 395 COLOUR_TEXT_REGION 390 739 395 739 51 STRAND 404 739 406 COLOUR_TEXT_REGION 404 739 406 739 51 STRAND 417 739 422 COLOUR_TEXT_REGION 417 739 422 739 51 STRAND 427 739 432 COLOUR_TEXT_REGION 427 739 432 739 51 STRAND 440 739 445 COLOUR_TEXT_REGION 440 739 445 739 51 STRAND 451 739 456 COLOUR_TEXT_REGION 451 739 456 739 51 HELIX 162 739 167 COLOUR_TEXT_REGION 162 739 167 739 50 HELIX 459 739 467 COLOUR_TEXT_REGION 459 739 467 739 50