SILENT_MODE BLOCK_FILE jp_Tx4rqSl.concise.blc MAX_NSEQ 1041 MAX_INPUT_LEN 1043 OUTPUT_FILE jp_Tx4rqSl.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 158 1030 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1031 158 1040 H SPACE SUB_CHARS 1 1031 158 1040 E SPACE SUB_CHARS 1 1031 158 1040 - SPACE STRAND 3 1034 11 COLOUR_TEXT_REGION 3 1034 11 1034 51 STRAND 40 1034 45 COLOUR_TEXT_REGION 40 1034 45 1034 51 STRAND 51 1034 58 COLOUR_TEXT_REGION 51 1034 58 1034 51 STRAND 65 1034 75 COLOUR_TEXT_REGION 65 1034 75 1034 51 STRAND 80 1034 86 COLOUR_TEXT_REGION 80 1034 86 1034 51 STRAND 95 1034 106 COLOUR_TEXT_REGION 95 1034 106 1034 51 STRAND 112 1034 122 COLOUR_TEXT_REGION 112 1034 122 1034 51 HELIX 15 1034 23 COLOUR_TEXT_REGION 15 1034 23 1034 50 HELIX 30 1034 33 COLOUR_TEXT_REGION 30 1034 33 1034 50 HELIX 132 1034 152 COLOUR_TEXT_REGION 132 1034 152 1034 50 STRAND 3 1039 11 COLOUR_TEXT_REGION 3 1039 11 1039 51 STRAND 41 1039 45 COLOUR_TEXT_REGION 41 1039 45 1039 51 STRAND 51 1039 58 COLOUR_TEXT_REGION 51 1039 58 1039 51 STRAND 65 1039 75 COLOUR_TEXT_REGION 65 1039 75 1039 51 STRAND 80 1039 86 COLOUR_TEXT_REGION 80 1039 86 1039 51 STRAND 95 1039 106 COLOUR_TEXT_REGION 95 1039 106 1039 51 STRAND 112 1039 122 COLOUR_TEXT_REGION 112 1039 122 1039 51 HELIX 15 1039 23 COLOUR_TEXT_REGION 15 1039 23 1039 50 HELIX 30 1039 34 COLOUR_TEXT_REGION 30 1039 34 1039 50 HELIX 132 1039 152 COLOUR_TEXT_REGION 132 1039 152 1039 50 STRAND 3 1040 11 COLOUR_TEXT_REGION 3 1040 11 1040 51 STRAND 40 1040 45 COLOUR_TEXT_REGION 40 1040 45 1040 51 STRAND 52 1040 58 COLOUR_TEXT_REGION 52 1040 58 1040 51 STRAND 67 1040 67 COLOUR_TEXT_REGION 67 1040 67 1040 51 STRAND 70 1040 74 COLOUR_TEXT_REGION 70 1040 74 1040 51 STRAND 79 1040 87 COLOUR_TEXT_REGION 79 1040 87 1040 51 STRAND 95 1040 106 COLOUR_TEXT_REGION 95 1040 106 1040 51 STRAND 112 1040 121 COLOUR_TEXT_REGION 112 1040 121 1040 51 HELIX 16 1040 24 COLOUR_TEXT_REGION 16 1040 24 1040 50 HELIX 30 1040 32 COLOUR_TEXT_REGION 30 1040 32 1040 50 HELIX 66 1040 66 COLOUR_TEXT_REGION 66 1040 66 1040 50 HELIX 68 1040 69 COLOUR_TEXT_REGION 68 1040 69 1040 50 HELIX 132 1040 151 COLOUR_TEXT_REGION 132 1040 151 1040 50