SILENT_MODE BLOCK_FILE jp_KDrmuOx.concise.blc MAX_NSEQ 296 MAX_INPUT_LEN 298 OUTPUT_FILE jp_KDrmuOx.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 146 285 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 286 146 295 H SPACE SUB_CHARS 1 286 146 295 E SPACE SUB_CHARS 1 286 146 295 - SPACE HELIX 5 289 34 COLOUR_TEXT_REGION 5 289 34 289 50 HELIX 42 289 42 COLOUR_TEXT_REGION 42 289 42 289 50 HELIX 57 289 68 COLOUR_TEXT_REGION 57 289 68 289 50 HELIX 70 289 85 COLOUR_TEXT_REGION 70 289 85 289 50 HELIX 90 289 113 COLOUR_TEXT_REGION 90 289 113 289 50 HELIX 118 289 144 COLOUR_TEXT_REGION 118 289 144 289 50 HELIX 5 294 34 COLOUR_TEXT_REGION 5 294 34 294 50 HELIX 58 294 68 COLOUR_TEXT_REGION 58 294 68 294 50 HELIX 70 294 85 COLOUR_TEXT_REGION 70 294 85 294 50 HELIX 90 294 113 COLOUR_TEXT_REGION 90 294 113 294 50 HELIX 118 294 144 COLOUR_TEXT_REGION 118 294 144 294 50 HELIX 5 295 34 COLOUR_TEXT_REGION 5 295 34 295 50 HELIX 41 295 46 COLOUR_TEXT_REGION 41 295 46 295 50 HELIX 57 295 67 COLOUR_TEXT_REGION 57 295 67 295 50 HELIX 73 295 85 COLOUR_TEXT_REGION 73 295 85 295 50 HELIX 90 295 113 COLOUR_TEXT_REGION 90 295 113 295 50 HELIX 118 295 144 COLOUR_TEXT_REGION 118 295 144 295 50