SILENT_MODE BLOCK_FILE jp__oXHMJS.concise.blc MAX_NSEQ 932 MAX_INPUT_LEN 934 OUTPUT_FILE jp__oXHMJS.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 84 921 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 922 84 931 H SPACE SUB_CHARS 1 922 84 931 E SPACE SUB_CHARS 1 922 84 931 - SPACE STRAND 10 925 15 COLOUR_TEXT_REGION 10 925 15 925 51 STRAND 19 925 23 COLOUR_TEXT_REGION 19 925 23 925 51 STRAND 28 925 36 COLOUR_TEXT_REGION 28 925 36 925 51 STRAND 52 925 56 COLOUR_TEXT_REGION 52 925 56 925 51 STRAND 63 925 69 COLOUR_TEXT_REGION 63 925 69 925 51 STRAND 78 925 81 COLOUR_TEXT_REGION 78 925 81 925 51 HELIX 4 925 9 COLOUR_TEXT_REGION 4 925 9 925 50 STRAND 10 930 16 COLOUR_TEXT_REGION 10 930 16 930 51 STRAND 19 930 23 COLOUR_TEXT_REGION 19 930 23 930 51 STRAND 29 930 37 COLOUR_TEXT_REGION 29 930 37 930 51 STRAND 52 930 56 COLOUR_TEXT_REGION 52 930 56 930 51 STRAND 63 930 69 COLOUR_TEXT_REGION 63 930 69 930 51 STRAND 78 930 81 COLOUR_TEXT_REGION 78 930 81 930 51 HELIX 4 930 9 COLOUR_TEXT_REGION 4 930 9 930 50 STRAND 11 931 15 COLOUR_TEXT_REGION 11 931 15 931 51 STRAND 19 931 23 COLOUR_TEXT_REGION 19 931 23 931 51 STRAND 28 931 34 COLOUR_TEXT_REGION 28 931 34 931 51 STRAND 53 931 56 COLOUR_TEXT_REGION 53 931 56 931 51 STRAND 63 931 70 COLOUR_TEXT_REGION 63 931 70 931 51 STRAND 78 931 81 COLOUR_TEXT_REGION 78 931 81 931 51 HELIX 4 931 9 COLOUR_TEXT_REGION 4 931 9 931 50