SILENT_MODE BLOCK_FILE jp_z42Xp8G.concise.blc MAX_NSEQ 899 MAX_INPUT_LEN 901 OUTPUT_FILE jp_z42Xp8G.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 121 888 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 889 121 898 H SPACE SUB_CHARS 1 889 121 898 E SPACE SUB_CHARS 1 889 121 898 - SPACE STRAND 34 892 40 COLOUR_TEXT_REGION 34 892 40 892 51 STRAND 63 892 68 COLOUR_TEXT_REGION 63 892 68 892 51 STRAND 93 892 97 COLOUR_TEXT_REGION 93 892 97 892 51 HELIX 7 892 27 COLOUR_TEXT_REGION 7 892 27 892 50 HELIX 45 892 60 COLOUR_TEXT_REGION 45 892 60 892 50 HELIX 75 892 85 COLOUR_TEXT_REGION 75 892 85 892 50 HELIX 106 892 112 COLOUR_TEXT_REGION 106 892 112 892 50 STRAND 34 897 40 COLOUR_TEXT_REGION 34 897 40 897 51 STRAND 63 897 68 COLOUR_TEXT_REGION 63 897 68 897 51 STRAND 93 897 97 COLOUR_TEXT_REGION 93 897 97 897 51 HELIX 7 897 27 COLOUR_TEXT_REGION 7 897 27 897 50 HELIX 45 897 60 COLOUR_TEXT_REGION 45 897 60 897 50 HELIX 75 897 85 COLOUR_TEXT_REGION 75 897 85 897 50 HELIX 106 897 112 COLOUR_TEXT_REGION 106 897 112 897 50 STRAND 4 898 4 COLOUR_TEXT_REGION 4 898 4 898 51 STRAND 33 898 40 COLOUR_TEXT_REGION 33 898 40 898 51 STRAND 63 898 68 COLOUR_TEXT_REGION 63 898 68 898 51 STRAND 93 898 97 COLOUR_TEXT_REGION 93 898 97 898 51 HELIX 7 898 27 COLOUR_TEXT_REGION 7 898 27 898 50 HELIX 45 898 60 COLOUR_TEXT_REGION 45 898 60 898 50 HELIX 75 898 85 COLOUR_TEXT_REGION 75 898 85 898 50 HELIX 106 898 112 COLOUR_TEXT_REGION 106 898 112 898 50