SILENT_MODE BLOCK_FILE jp_2lzie6v.concise.blc MAX_NSEQ 532 MAX_INPUT_LEN 534 OUTPUT_FILE jp_2lzie6v.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 221 521 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 522 221 531 H SPACE SUB_CHARS 1 522 221 531 E SPACE SUB_CHARS 1 522 221 531 - SPACE STRAND 5 525 7 COLOUR_TEXT_REGION 5 525 7 525 51 STRAND 15 525 18 COLOUR_TEXT_REGION 15 525 18 525 51 STRAND 25 525 50 COLOUR_TEXT_REGION 25 525 50 525 51 STRAND 88 525 96 COLOUR_TEXT_REGION 88 525 96 525 51 STRAND 146 525 152 COLOUR_TEXT_REGION 146 525 152 525 51 STRAND 157 525 163 COLOUR_TEXT_REGION 157 525 163 525 51 STRAND 170 525 175 COLOUR_TEXT_REGION 170 525 175 525 51 HELIX 54 525 61 COLOUR_TEXT_REGION 54 525 61 525 50 HELIX 75 525 82 COLOUR_TEXT_REGION 75 525 82 525 50 HELIX 100 525 117 COLOUR_TEXT_REGION 100 525 117 525 50 HELIX 124 525 136 COLOUR_TEXT_REGION 124 525 136 525 50 HELIX 178 525 188 COLOUR_TEXT_REGION 178 525 188 525 50 HELIX 196 525 211 COLOUR_TEXT_REGION 196 525 211 525 50 STRAND 5 530 7 COLOUR_TEXT_REGION 5 530 7 530 51 STRAND 16 530 17 COLOUR_TEXT_REGION 16 530 17 530 51 STRAND 25 530 50 COLOUR_TEXT_REGION 25 530 50 530 51 STRAND 88 530 95 COLOUR_TEXT_REGION 88 530 95 530 51 STRAND 146 530 152 COLOUR_TEXT_REGION 146 530 152 530 51 STRAND 157 530 162 COLOUR_TEXT_REGION 157 530 162 530 51 STRAND 170 530 175 COLOUR_TEXT_REGION 170 530 175 530 51 HELIX 55 530 59 COLOUR_TEXT_REGION 55 530 59 530 50 HELIX 75 530 82 COLOUR_TEXT_REGION 75 530 82 530 50 HELIX 100 530 117 COLOUR_TEXT_REGION 100 530 117 530 50 HELIX 123 530 136 COLOUR_TEXT_REGION 123 530 136 530 50 HELIX 178 530 188 COLOUR_TEXT_REGION 178 530 188 530 50 HELIX 196 530 210 COLOUR_TEXT_REGION 196 530 210 530 50 STRAND 5 531 7 COLOUR_TEXT_REGION 5 531 7 531 51 STRAND 11 531 11 COLOUR_TEXT_REGION 11 531 11 531 51 STRAND 15 531 18 COLOUR_TEXT_REGION 15 531 18 531 51 STRAND 25 531 29 COLOUR_TEXT_REGION 25 531 29 531 51 STRAND 35 531 50 COLOUR_TEXT_REGION 35 531 50 531 51 STRAND 88 531 96 COLOUR_TEXT_REGION 88 531 96 531 51 STRAND 146 531 151 COLOUR_TEXT_REGION 146 531 151 531 51 STRAND 156 531 163 COLOUR_TEXT_REGION 156 531 163 531 51 STRAND 171 531 175 COLOUR_TEXT_REGION 171 531 175 531 51 HELIX 53 531 62 COLOUR_TEXT_REGION 53 531 62 531 50 HELIX 75 531 81 COLOUR_TEXT_REGION 75 531 81 531 50 HELIX 101 531 117 COLOUR_TEXT_REGION 101 531 117 531 50 HELIX 125 531 136 COLOUR_TEXT_REGION 125 531 136 531 50 HELIX 178 531 189 COLOUR_TEXT_REGION 178 531 189 531 50 HELIX 196 531 211 COLOUR_TEXT_REGION 196 531 211 531 50