SILENT_MODE BLOCK_FILE jp_C9fel1P.concise.blc MAX_NSEQ 1090 MAX_INPUT_LEN 1092 OUTPUT_FILE jp_C9fel1P.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 240 1079 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1080 240 1089 H SPACE SUB_CHARS 1 1080 240 1089 E SPACE SUB_CHARS 1 1080 240 1089 - SPACE STRAND 17 1083 20 COLOUR_TEXT_REGION 17 1083 20 1083 51 STRAND 24 1083 29 COLOUR_TEXT_REGION 24 1083 29 1083 51 STRAND 35 1083 43 COLOUR_TEXT_REGION 35 1083 43 1083 51 STRAND 138 1083 146 COLOUR_TEXT_REGION 138 1083 146 1083 51 STRAND 160 1083 162 COLOUR_TEXT_REGION 160 1083 162 1083 51 STRAND 166 1083 173 COLOUR_TEXT_REGION 166 1083 173 1083 51 STRAND 179 1083 185 COLOUR_TEXT_REGION 179 1083 185 1083 51 STRAND 198 1083 201 COLOUR_TEXT_REGION 198 1083 201 1083 51 HELIX 95 1083 104 COLOUR_TEXT_REGION 95 1083 104 1083 50 HELIX 116 1083 132 COLOUR_TEXT_REGION 116 1083 132 1083 50 HELIX 203 1083 210 COLOUR_TEXT_REGION 203 1083 210 1083 50 HELIX 220 1083 228 COLOUR_TEXT_REGION 220 1083 228 1083 50 STRAND 17 1088 20 COLOUR_TEXT_REGION 17 1088 20 1088 51 STRAND 24 1088 29 COLOUR_TEXT_REGION 24 1088 29 1088 51 STRAND 36 1088 43 COLOUR_TEXT_REGION 36 1088 43 1088 51 STRAND 105 1088 108 COLOUR_TEXT_REGION 105 1088 108 1088 51 STRAND 138 1088 146 COLOUR_TEXT_REGION 138 1088 146 1088 51 STRAND 161 1088 162 COLOUR_TEXT_REGION 161 1088 162 1088 51 STRAND 166 1088 173 COLOUR_TEXT_REGION 166 1088 173 1088 51 STRAND 179 1088 185 COLOUR_TEXT_REGION 179 1088 185 1088 51 STRAND 199 1088 201 COLOUR_TEXT_REGION 199 1088 201 1088 51 HELIX 96 1088 104 COLOUR_TEXT_REGION 96 1088 104 1088 50 HELIX 116 1088 132 COLOUR_TEXT_REGION 116 1088 132 1088 50 HELIX 203 1088 210 COLOUR_TEXT_REGION 203 1088 210 1088 50 HELIX 220 1088 227 COLOUR_TEXT_REGION 220 1088 227 1088 50 STRAND 17 1089 20 COLOUR_TEXT_REGION 17 1089 20 1089 51 STRAND 24 1089 28 COLOUR_TEXT_REGION 24 1089 28 1089 51 STRAND 35 1089 42 COLOUR_TEXT_REGION 35 1089 42 1089 51 STRAND 138 1089 145 COLOUR_TEXT_REGION 138 1089 145 1089 51 STRAND 159 1089 162 COLOUR_TEXT_REGION 159 1089 162 1089 51 STRAND 166 1089 172 COLOUR_TEXT_REGION 166 1089 172 1089 51 STRAND 179 1089 184 COLOUR_TEXT_REGION 179 1089 184 1089 51 STRAND 198 1089 201 COLOUR_TEXT_REGION 198 1089 201 1089 51 HELIX 95 1089 104 COLOUR_TEXT_REGION 95 1089 104 1089 50 HELIX 117 1089 132 COLOUR_TEXT_REGION 117 1089 132 1089 50 HELIX 203 1089 210 COLOUR_TEXT_REGION 203 1089 210 1089 50 HELIX 220 1089 228 COLOUR_TEXT_REGION 220 1089 228 1089 50