SILENT_MODE BLOCK_FILE jp_4fKl5NJ.concise.blc MAX_NSEQ 888 MAX_INPUT_LEN 890 OUTPUT_FILE jp_4fKl5NJ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 265 877 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 878 265 887 H SPACE SUB_CHARS 1 878 265 887 E SPACE SUB_CHARS 1 878 265 887 - SPACE STRAND 11 881 15 COLOUR_TEXT_REGION 11 881 15 881 51 STRAND 40 881 41 COLOUR_TEXT_REGION 40 881 41 881 51 STRAND 81 881 85 COLOUR_TEXT_REGION 81 881 85 881 51 STRAND 129 881 133 COLOUR_TEXT_REGION 129 881 133 881 51 STRAND 164 881 169 COLOUR_TEXT_REGION 164 881 169 881 51 HELIX 24 881 34 COLOUR_TEXT_REGION 24 881 34 881 50 HELIX 53 881 59 COLOUR_TEXT_REGION 53 881 59 881 50 HELIX 69 881 78 COLOUR_TEXT_REGION 69 881 78 881 50 HELIX 94 881 103 COLOUR_TEXT_REGION 94 881 103 881 50 HELIX 145 881 159 COLOUR_TEXT_REGION 145 881 159 881 50 HELIX 183 881 194 COLOUR_TEXT_REGION 183 881 194 881 50 HELIX 201 881 217 COLOUR_TEXT_REGION 201 881 217 881 50 HELIX 223 881 235 COLOUR_TEXT_REGION 223 881 235 881 50 HELIX 237 881 249 COLOUR_TEXT_REGION 237 881 249 881 50 STRAND 11 886 15 COLOUR_TEXT_REGION 11 886 15 886 51 STRAND 40 886 41 COLOUR_TEXT_REGION 40 886 41 886 51 STRAND 81 886 84 COLOUR_TEXT_REGION 81 886 84 886 51 STRAND 129 886 133 COLOUR_TEXT_REGION 129 886 133 886 51 STRAND 139 886 141 COLOUR_TEXT_REGION 139 886 141 886 51 STRAND 155 886 159 COLOUR_TEXT_REGION 155 886 159 886 51 STRAND 163 886 169 COLOUR_TEXT_REGION 163 886 169 886 51 HELIX 24 886 34 COLOUR_TEXT_REGION 24 886 34 886 50 HELIX 53 886 59 COLOUR_TEXT_REGION 53 886 59 886 50 HELIX 69 886 79 COLOUR_TEXT_REGION 69 886 79 886 50 HELIX 147 886 154 COLOUR_TEXT_REGION 147 886 154 886 50 HELIX 183 886 194 COLOUR_TEXT_REGION 183 886 194 886 50 HELIX 202 886 216 COLOUR_TEXT_REGION 202 886 216 886 50 HELIX 223 886 235 COLOUR_TEXT_REGION 223 886 235 886 50 HELIX 237 886 249 COLOUR_TEXT_REGION 237 886 249 886 50 STRAND 11 887 15 COLOUR_TEXT_REGION 11 887 15 887 51 STRAND 81 887 85 COLOUR_TEXT_REGION 81 887 85 887 51 STRAND 128 887 133 COLOUR_TEXT_REGION 128 887 133 887 51 STRAND 164 887 169 COLOUR_TEXT_REGION 164 887 169 887 51 HELIX 24 887 35 COLOUR_TEXT_REGION 24 887 35 887 50 HELIX 54 887 59 COLOUR_TEXT_REGION 54 887 59 887 50 HELIX 69 887 77 COLOUR_TEXT_REGION 69 887 77 887 50 HELIX 93 887 104 COLOUR_TEXT_REGION 93 887 104 887 50 HELIX 144 887 160 COLOUR_TEXT_REGION 144 887 160 887 50 HELIX 183 887 193 COLOUR_TEXT_REGION 183 887 193 887 50 HELIX 201 887 218 COLOUR_TEXT_REGION 201 887 218 887 50 HELIX 223 887 235 COLOUR_TEXT_REGION 223 887 235 887 50 HELIX 237 887 249 COLOUR_TEXT_REGION 237 887 249 887 50