SILENT_MODE BLOCK_FILE jp_laFIWt0.concise.blc MAX_NSEQ 1595 MAX_INPUT_LEN 1597 OUTPUT_FILE jp_laFIWt0.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 105 1584 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1585 105 1594 H SPACE SUB_CHARS 1 1585 105 1594 E SPACE SUB_CHARS 1 1585 105 1594 - SPACE STRAND 4 1588 10 COLOUR_TEXT_REGION 4 1588 10 1588 51 STRAND 15 1588 19 COLOUR_TEXT_REGION 15 1588 19 1588 51 STRAND 47 1588 51 COLOUR_TEXT_REGION 47 1588 51 1588 51 STRAND 63 1588 69 COLOUR_TEXT_REGION 63 1588 69 1588 51 STRAND 87 1588 88 COLOUR_TEXT_REGION 87 1588 88 1588 51 STRAND 99 1588 102 COLOUR_TEXT_REGION 99 1588 102 1588 51 HELIX 21 1588 31 COLOUR_TEXT_REGION 21 1588 31 1588 50 HELIX 72 1588 86 COLOUR_TEXT_REGION 72 1588 86 1588 50 STRAND 4 1593 10 COLOUR_TEXT_REGION 4 1593 10 1593 51 STRAND 15 1593 19 COLOUR_TEXT_REGION 15 1593 19 1593 51 STRAND 47 1593 51 COLOUR_TEXT_REGION 47 1593 51 1593 51 STRAND 58 1593 60 COLOUR_TEXT_REGION 58 1593 60 1593 51 STRAND 63 1593 69 COLOUR_TEXT_REGION 63 1593 69 1593 51 STRAND 86 1593 88 COLOUR_TEXT_REGION 86 1593 88 1593 51 STRAND 99 1593 102 COLOUR_TEXT_REGION 99 1593 102 1593 51 HELIX 21 1593 31 COLOUR_TEXT_REGION 21 1593 31 1593 50 HELIX 72 1593 85 COLOUR_TEXT_REGION 72 1593 85 1593 50 STRAND 4 1594 9 COLOUR_TEXT_REGION 4 1594 9 1594 51 STRAND 14 1594 18 COLOUR_TEXT_REGION 14 1594 18 1594 51 STRAND 47 1594 52 COLOUR_TEXT_REGION 47 1594 52 1594 51 STRAND 63 1594 69 COLOUR_TEXT_REGION 63 1594 69 1594 51 STRAND 87 1594 88 COLOUR_TEXT_REGION 87 1594 88 1594 51 STRAND 99 1594 102 COLOUR_TEXT_REGION 99 1594 102 1594 51 HELIX 19 1594 31 COLOUR_TEXT_REGION 19 1594 31 1594 50 HELIX 72 1594 84 COLOUR_TEXT_REGION 72 1594 84 1594 50 HELIX 86 1594 86 COLOUR_TEXT_REGION 86 1594 86 1594 50