SILENT_MODE BLOCK_FILE jp_LOe0P_G.concise.blc MAX_NSEQ 906 MAX_INPUT_LEN 908 OUTPUT_FILE jp_LOe0P_G.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 118 895 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 896 118 905 H SPACE SUB_CHARS 1 896 118 905 E SPACE SUB_CHARS 1 896 118 905 - SPACE STRAND 18 899 22 COLOUR_TEXT_REGION 18 899 22 899 51 STRAND 25 899 30 COLOUR_TEXT_REGION 25 899 30 899 51 STRAND 38 899 44 COLOUR_TEXT_REGION 38 899 44 899 51 STRAND 84 899 88 COLOUR_TEXT_REGION 84 899 88 899 51 STRAND 96 899 105 COLOUR_TEXT_REGION 96 899 105 899 51 HELIX 56 899 76 COLOUR_TEXT_REGION 56 899 76 899 50 STRAND 19 904 22 COLOUR_TEXT_REGION 19 904 22 904 51 STRAND 25 904 30 COLOUR_TEXT_REGION 25 904 30 904 51 STRAND 39 904 44 COLOUR_TEXT_REGION 39 904 44 904 51 STRAND 83 904 88 COLOUR_TEXT_REGION 83 904 88 904 51 STRAND 96 904 105 COLOUR_TEXT_REGION 96 904 105 904 51 HELIX 56 904 76 COLOUR_TEXT_REGION 56 904 76 904 50 STRAND 18 905 21 COLOUR_TEXT_REGION 18 905 21 905 51 STRAND 25 905 30 COLOUR_TEXT_REGION 25 905 30 905 51 STRAND 38 905 44 COLOUR_TEXT_REGION 38 905 44 905 51 STRAND 85 905 88 COLOUR_TEXT_REGION 85 905 88 905 51 STRAND 97 905 104 COLOUR_TEXT_REGION 97 905 104 905 51 HELIX 51 905 54 COLOUR_TEXT_REGION 51 905 54 905 50 HELIX 60 905 76 COLOUR_TEXT_REGION 60 905 76 905 50