SILENT_MODE BLOCK_FILE jp_ojzWo5r.concise.blc MAX_NSEQ 880 MAX_INPUT_LEN 882 OUTPUT_FILE jp_ojzWo5r.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 302 869 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 870 302 879 H SPACE SUB_CHARS 1 870 302 879 E SPACE SUB_CHARS 1 870 302 879 - SPACE STRAND 5 873 10 COLOUR_TEXT_REGION 5 873 10 873 51 STRAND 15 873 18 COLOUR_TEXT_REGION 15 873 18 873 51 STRAND 36 873 43 COLOUR_TEXT_REGION 36 873 43 873 51 STRAND 48 873 53 COLOUR_TEXT_REGION 48 873 53 873 51 STRAND 58 873 62 COLOUR_TEXT_REGION 58 873 62 873 51 STRAND 79 873 82 COLOUR_TEXT_REGION 79 873 82 873 51 STRAND 90 873 96 COLOUR_TEXT_REGION 90 873 96 873 51 STRAND 104 873 109 COLOUR_TEXT_REGION 104 873 109 873 51 STRAND 114 873 118 COLOUR_TEXT_REGION 114 873 118 873 51 STRAND 130 873 133 COLOUR_TEXT_REGION 130 873 133 873 51 STRAND 141 873 146 COLOUR_TEXT_REGION 141 873 146 873 51 STRAND 152 873 157 COLOUR_TEXT_REGION 152 873 157 873 51 STRAND 161 873 166 COLOUR_TEXT_REGION 161 873 166 873 51 STRAND 182 873 183 COLOUR_TEXT_REGION 182 873 183 873 51 STRAND 193 873 197 COLOUR_TEXT_REGION 193 873 197 873 51 STRAND 204 873 209 COLOUR_TEXT_REGION 204 873 209 873 51 STRAND 214 873 217 COLOUR_TEXT_REGION 214 873 217 873 51 STRAND 233 873 236 COLOUR_TEXT_REGION 233 873 236 873 51 STRAND 244 873 250 COLOUR_TEXT_REGION 244 873 250 873 51 STRAND 255 873 260 COLOUR_TEXT_REGION 255 873 260 873 51 STRAND 265 873 269 COLOUR_TEXT_REGION 265 873 269 873 51 STRAND 283 873 288 COLOUR_TEXT_REGION 283 873 288 873 51 STRAND 293 873 299 COLOUR_TEXT_REGION 293 873 299 873 51 HELIX 231 873 232 COLOUR_TEXT_REGION 231 873 232 873 50 STRAND 5 878 10 COLOUR_TEXT_REGION 5 878 10 878 51 STRAND 15 878 17 COLOUR_TEXT_REGION 15 878 17 878 51 STRAND 36 878 43 COLOUR_TEXT_REGION 36 878 43 878 51 STRAND 48 878 53 COLOUR_TEXT_REGION 48 878 53 878 51 STRAND 58 878 62 COLOUR_TEXT_REGION 58 878 62 878 51 STRAND 90 878 95 COLOUR_TEXT_REGION 90 878 95 878 51 STRAND 104 878 109 COLOUR_TEXT_REGION 104 878 109 878 51 STRAND 114 878 117 COLOUR_TEXT_REGION 114 878 117 878 51 STRAND 130 878 133 COLOUR_TEXT_REGION 130 878 133 878 51 STRAND 141 878 146 COLOUR_TEXT_REGION 141 878 146 878 51 STRAND 152 878 157 COLOUR_TEXT_REGION 152 878 157 878 51 STRAND 161 878 166 COLOUR_TEXT_REGION 161 878 166 878 51 STRAND 182 878 183 COLOUR_TEXT_REGION 182 878 183 878 51 STRAND 192 878 198 COLOUR_TEXT_REGION 192 878 198 878 51 STRAND 204 878 209 COLOUR_TEXT_REGION 204 878 209 878 51 STRAND 214 878 217 COLOUR_TEXT_REGION 214 878 217 878 51 STRAND 232 878 236 COLOUR_TEXT_REGION 232 878 236 878 51 STRAND 244 878 250 COLOUR_TEXT_REGION 244 878 250 878 51 STRAND 255 878 260 COLOUR_TEXT_REGION 255 878 260 878 51 STRAND 265 878 269 COLOUR_TEXT_REGION 265 878 269 878 51 STRAND 283 878 288 COLOUR_TEXT_REGION 283 878 288 878 51 STRAND 293 878 300 COLOUR_TEXT_REGION 293 878 300 878 51 STRAND 5 879 10 COLOUR_TEXT_REGION 5 879 10 879 51 STRAND 14 879 18 COLOUR_TEXT_REGION 14 879 18 879 51 STRAND 36 879 42 COLOUR_TEXT_REGION 36 879 42 879 51 STRAND 48 879 53 COLOUR_TEXT_REGION 48 879 53 879 51 STRAND 57 879 61 COLOUR_TEXT_REGION 57 879 61 879 51 STRAND 79 879 83 COLOUR_TEXT_REGION 79 879 83 879 51 STRAND 91 879 96 COLOUR_TEXT_REGION 91 879 96 879 51 STRAND 104 879 109 COLOUR_TEXT_REGION 104 879 109 879 51 STRAND 113 879 118 COLOUR_TEXT_REGION 113 879 118 879 51 STRAND 130 879 134 COLOUR_TEXT_REGION 130 879 134 879 51 STRAND 142 879 147 COLOUR_TEXT_REGION 142 879 147 879 51 STRAND 153 879 157 COLOUR_TEXT_REGION 153 879 157 879 51 STRAND 162 879 166 COLOUR_TEXT_REGION 162 879 166 879 51 STRAND 194 879 196 COLOUR_TEXT_REGION 194 879 196 879 51 STRAND 205 879 209 COLOUR_TEXT_REGION 205 879 209 879 51 STRAND 244 879 250 COLOUR_TEXT_REGION 244 879 250 879 51 STRAND 256 879 260 COLOUR_TEXT_REGION 256 879 260 879 51 STRAND 264 879 269 COLOUR_TEXT_REGION 264 879 269 879 51 STRAND 282 879 287 COLOUR_TEXT_REGION 282 879 287 879 51 STRAND 293 879 299 COLOUR_TEXT_REGION 293 879 299 879 51 HELIX 167 879 167 COLOUR_TEXT_REGION 167 879 167 879 50 HELIX 180 879 182 COLOUR_TEXT_REGION 180 879 182 879 50 HELIX 219 879 225 COLOUR_TEXT_REGION 219 879 225 879 50 HELIX 229 879 236 COLOUR_TEXT_REGION 229 879 236 879 50