SILENT_MODE BLOCK_FILE jp_tl6DCaX.concise.blc MAX_NSEQ 1037 MAX_INPUT_LEN 1039 OUTPUT_FILE jp_tl6DCaX.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 147 1026 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1027 147 1036 H SPACE SUB_CHARS 1 1027 147 1036 E SPACE SUB_CHARS 1 1027 147 1036 - SPACE HELIX 3 1030 16 COLOUR_TEXT_REGION 3 1030 16 1030 50 HELIX 25 1030 35 COLOUR_TEXT_REGION 25 1030 35 1030 50 HELIX 40 1030 67 COLOUR_TEXT_REGION 40 1030 67 1030 50 HELIX 72 1030 106 COLOUR_TEXT_REGION 72 1030 106 1030 50 HELIX 110 1030 143 COLOUR_TEXT_REGION 110 1030 143 1030 50 HELIX 3 1035 15 COLOUR_TEXT_REGION 3 1035 15 1035 50 HELIX 25 1035 35 COLOUR_TEXT_REGION 25 1035 35 1035 50 HELIX 40 1035 67 COLOUR_TEXT_REGION 40 1035 67 1035 50 HELIX 72 1035 87 COLOUR_TEXT_REGION 72 1035 87 1035 50 HELIX 89 1035 89 COLOUR_TEXT_REGION 89 1035 89 1035 50 HELIX 91 1035 107 COLOUR_TEXT_REGION 91 1035 107 1035 50 HELIX 110 1035 143 COLOUR_TEXT_REGION 110 1035 143 1035 50 HELIX 3 1036 18 COLOUR_TEXT_REGION 3 1036 18 1036 50 HELIX 25 1036 34 COLOUR_TEXT_REGION 25 1036 34 1036 50 HELIX 41 1036 67 COLOUR_TEXT_REGION 41 1036 67 1036 50 HELIX 72 1036 88 COLOUR_TEXT_REGION 72 1036 88 1036 50 HELIX 90 1036 106 COLOUR_TEXT_REGION 90 1036 106 1036 50 HELIX 110 1036 144 COLOUR_TEXT_REGION 110 1036 144 1036 50